RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 RBM12BQ8IXT5 1001 aaKnown RBP11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 DCBLD1Q8N8Z6 715 aa11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 BBOF1Q8ND07 529 aa11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 SPATA4Q8NEY3 305 aa11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 PATE1Q8WXA2 126 aa11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 CXorf40BQ96DE9 158 aa11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 SGF29Q96ES7 293 aa11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 AHCYL2Q96HN2 611 aaKnown RBP11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 ZNF778Q96MU6 729 aa11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 SLC38A3Q99624 504 aa11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 DPYSL5Q9BPU6 564 aa11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 NAT9Q9BTE0 207 aa11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 TUBB2BQ9BVA1 445 aa11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 EPB41L1Q9H4G0 881 aa11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 SARS2Q9NP81 518 aaKnown RBP11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 WASH6PQ9NQA3 447 aa11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 TREX1Q9NSU2 369 aa11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 POT1Q9NUX5 634 aa11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 KCNK4Q9NYG8 393 aa11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 SLC23A2Q9UGH3 650 aa11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 ACSL5Q9ULC5 683 aa11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 MAD1L1Q9Y6D9 718 aa11.85□□□□□ -0.51
ARHGEF1-216ENST00000598587 ASXL3Q9C0F0 2248 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 C17orf113A0A1B0GUU1 675 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 FAM237BA0A1B0GVD1 139 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 A6NCN8 305 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 FAM187AA6NFU0 413 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 EFCAB8A8MWE9 144 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 D6RAR5 112 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 CD3EAPO15446 510 aaKnown RBP11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 DUX1O43812 170 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 AVILO75366 819 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 URI1O94763 535 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 VIPP01282 170 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 POLBP06746 335 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 XRCC1P18887 633 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 SPINK2P20155 84 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 RPL10P27635 214 aaKnown RBP11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 NMBRP28336 390 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 ALDH4A1P30038 563 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 CDKN1CP49918 316 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 EPHA4P54764 986 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 B4GALNT1Q00973 533 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 CALCOCO2Q13137 446 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 SYTL3Q4VX76 610 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 CDCP2Q5VXM1 449 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 ABRAXAS1Q6UWZ7 409 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 CCNI2Q6ZMN8 369 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 PIANPQ8IYJ0 282 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 PDIK1LQ8N165 341 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 Q8N9G6 341 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 OR10G6Q8NH81 332 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 ZNF592Q92610 1267 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 NXPE2Q96DL1 559 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 TMEM74Q96NL1 305 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 TRIM51Q9BSJ1 452 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 CCM2Q9BSQ5 444 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 RAB17Q9H0T7 212 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 LRRN3Q9H3W5 708 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 PRDM8Q9NQV8 689 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 CPNE7Q9UBL6 633 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 CDC23Q9UJX2 597 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 VPS9D1Q9Y2B5 631 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 UTP11Q9Y3A2 253 aaKnown RBP11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 SPTBN2O15020 2390 aa11.84□□□□□ -0.51
ARHGEF1-216ENST00000598587 UNC13CQ8NB66 2214 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 TMEM8BA6NDV4 472 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 LILRA5A6NI73 299 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 PRR19A6NJB7 356 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 NTN3O00634 580 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 CSO75390 466 aaKnown RBP11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 NDUFS3O75489 264 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 USP1O94782 785 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 VAPBO95292 243 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 CPNE6O95741 557 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 TTC4O95801 387 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 TOP3BO95985 862 aaKnown RBP11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 CA5AP35218 305 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 MAGEA3P43357 314 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 DRG2P55039 364 aaKnown RBP11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 CCL7P80098 99 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 PLOD1Q02809 727 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 C2orf54Q08AI8 447 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 TARDBPQ13148 414 aaKnown RBP eCLIP11.83□□□□□ -0.521e-7■■■■■ 53.9
ARHGEF1-216ENST00000598587 NFE2L1Q14494 772 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 WHAMMP3Q1A5X7 153 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 METRNLQ641Q3 311 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 ZNF572Q7Z3I7 529 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 PIM3Q86V86 326 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 LRRC6Q86X45 466 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 SFTPA2Q8IWL1 248 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 LMNTD2Q8IXW0 634 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 MNS1Q8NEH6 495 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 KIF18AQ8NI77 898 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 CALML6Q8TD86 181 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 ZNF669Q96BR6 464 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 MFSD3Q96ES6 412 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 STAMBPL1Q96FJ0 436 aa11.83□□□□□ -0.52
ARHGEF1-216ENST00000598587 TCF12Q99081 682 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms