RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 PRAMEF17Q5VTA0 474 aa10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 FAM69BQ5VUD6 431 aa10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 PDPK2PQ6A1A2 396 aa10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 HIST2H2BCQ6DN03 193 aa10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 TCTN3Q6NUS6 607 aa10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 IRGCQ6NXR0 463 aa10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 FBXO38Q6PIJ6 1188 aa10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 RFX6Q8HWS3 928 aa10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 RASGRP3Q8IV61 690 aa10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 TRIM48Q8IWZ4 208 aa10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 SLC25A41Q8N5S1 370 aa10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 BEND7Q8N7W2 519 aaPredicted RBP10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 SPDYE1Q8NFV5 336 aaPredicted RBP10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 CTNNBL1Q8WYA6 563 aaPredicted RBP10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 INSM2Q96T92 566 aaPredicted RBP10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 MAP3K3Q99759 626 aa10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 RAB33BQ9H082 229 aa10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 GOLPH3Q9H4A6 298 aa10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 LHX9Q9NQ69 397 aa10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 LNPEPQ9UIQ6 1025 aa10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 KCTD3Q9Y597 815 aa10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 PCDHGA6Q9Y5G7 932 aa10.8□□□□□ -0.68
GRAMD1A-209ENST00000598580 ITPR2Q14571 2701 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 SPTBP11277 2137 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 PIPSLA2A3N6 862 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 DDX3YO15523 660 aaKnown RBP10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 SGTAO43765 313 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 CREG1O75629 220 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 KRT1P04264 644 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 EBLN1P0CF75 366 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 TNNT1P13805 278 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 FECHP22830 423 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 UQCRFS1P47985 274 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 CD97P48960 835 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 KLRB1Q12918 225 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 MSLNQ13421 630 aaPredicted RBP10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 OLIG2Q13516 323 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 DNASE1L3Q13609 305 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 NFE2L1Q14494 772 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 ZFYVE27Q5T4F4 411 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 GPRC6AQ5T6X5 926 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 LRRC38Q5VT99 294 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 CPZQ66K79 652 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 DUS1LQ6P1R4 473 aaKnown RBP10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 TMEM220Q6QAJ8 160 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 FAM151BQ6UXP7 276 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 VSIG1Q86XK7 387 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 TRAPPC5Q8IUR0 188 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 RHOT1Q8IXI2 618 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 LILRA3Q8N6C8 439 aaPredicted RBP10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 AVL9Q8NBF6 648 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 OR8K1Q8NGG5 319 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 CXorf40BQ96DE9 158 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 ZNF830Q96NB3 372 aaPredicted RBP10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 TWSG1Q9GZX9 223 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 RAD18Q9NS91 495 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 HAUS2Q9NVX0 235 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 PADI1Q9ULC6 663 aa10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 CFAP20Q9Y6A4 193 aaKnown RBP10.79□□□□□ -0.68
GRAMD1A-209ENST00000598580 A0A0A6YYK5 440 aaPredicted RBP10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 SSU72P8A0A1W2PR75 194 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 OR2AG2A6NM03 316 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 AGTP01019 485 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 RNF224P0DH78 156 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 COMTP21964 271 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 ARHGAP25P42331 645 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 ARCN1P48444 511 aaKnown RBP10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 MARCKSL1P49006 195 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 PMS2P54278 862 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 DMPKQ09013 629 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 CHAF1BQ13112 559 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 IL10RAQ13651 578 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 METRNLQ641Q3 311 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 ASB18Q6ZVZ8 466 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 AMZ2Q86W34 360 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 PPP1R3BQ86XI6 285 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 ZNF567Q8N184 647 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 DDHD1Q8NEL9 900 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 DTX3LQ8TDB6 740 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 IQCDQ96DY2 449 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 STAMBPL1Q96FJ0 436 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 ZDHHC12Q96GR4 267 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 MAK16Q9BXY0 300 aaKnown RBP10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 ACTL8Q9H568 366 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 FAM153AQ9UHL3 310 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 TFR2Q9UP52 801 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 POLHQ9Y253 713 aa10.78□□□□□ -0.68
GRAMD1A-209ENST00000598580 SEC16AO15027 2179 aa10.77□□□□□ -0.68
GRAMD1A-209ENST00000598580 PPP1R12AO14974 1030 aaPredicted RBP10.77□□□□□ -0.69
GRAMD1A-209ENST00000598580 AKR1B10O60218 316 aa10.77□□□□□ -0.69
GRAMD1A-209ENST00000598580 CST8O60676 142 aa10.77□□□□□ -0.69
GRAMD1A-209ENST00000598580 LCA5LO95447 670 aa10.77□□□□□ -0.69
GRAMD1A-209ENST00000598580 RECKO95980 971 aa10.77□□□□□ -0.69
GRAMD1A-209ENST00000598580 EPOP01588 193 aa10.77□□□□□ -0.69
GRAMD1A-209ENST00000598580 MTHFD1P11586 935 aaKnown RBP10.77□□□□□ -0.69
GRAMD1A-209ENST00000598580 GPS2Q13227 327 aa10.77□□□□□ -0.69
GRAMD1A-209ENST00000598580 TUBB3Q13509 450 aa10.77□□□□□ -0.69
GRAMD1A-209ENST00000598580 SEMA5AQ13591 1074 aa10.77□□□□□ -0.69
GRAMD1A-209ENST00000598580 TCEAL1Q15170 157 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms