RNA–Protein interactions for RNA: ENST00000597354.1

CAPN12-206, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-206ENST00000597354 LYPLAL1Q5VWZ2 237 aa16.46■□□□□ 0.23
CAPN12-206ENST00000597354 IYDQ6PHW0 289 aa16.46■□□□□ 0.23
CAPN12-206ENST00000597354 IGDCC3Q8IVU1 814 aa16.46■□□□□ 0.23
CAPN12-206ENST00000597354 CFAP206Q8IYR0 622 aa16.46■□□□□ 0.23
CAPN12-206ENST00000597354 SFRP1Q8N474 314 aa16.46■□□□□ 0.23
CAPN12-206ENST00000597354 WDR37Q9Y2I8 494 aa16.46■□□□□ 0.23
CAPN12-206ENST00000597354 DNMT3AQ9Y6K1 912 aaPredicted RBP16.46■□□□□ 0.23
CAPN12-206ENST00000597354 PTPRBP23467 1997 aa16.46■□□□□ 0.22
CAPN12-206ENST00000597354 BPTFQ12830 3046 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 PRAMEF33A0A0G2JMD5 474 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 MGAT4DA6NG13 374 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 PRR19A6NJB7 356 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 OR52A4PA6NMU1 304 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 TP73O15350 636 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 RPLP0P05388 317 aaKnown RBP16.45■□□□□ 0.22
CAPN12-206ENST00000597354 GP1BAP07359 652 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 BRAFP15056 766 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 PAMP19021 973 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 ALDH4A1P30038 563 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 NSG1P42857 185 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 ARCN1P48444 511 aaKnown RBP16.45■□□□□ 0.22
CAPN12-206ENST00000597354 OR1D5P58170 312 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 E2F1Q01094 437 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 CLCA4Q14CN2 919 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 TRADDQ15628 312 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 DNAJC21Q5F1R6 531 aaKnown RBP16.45■□□□□ 0.22
CAPN12-206ENST00000597354 KIAA0930Q6ICG6 404 aaPredicted RBP16.45■□□□□ 0.22
CAPN12-206ENST00000597354 NAPRTQ6XQN6 538 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 CERS6Q6ZMG9 384 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 UNC5BQ8IZJ1 945 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 PDIK1LQ8N165 341 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 OR6C4Q8NGE1 309 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 OR2L2Q8NH16 312 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 SGSM3Q96HU1 749 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 TTC1Q99614 292 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 LRRC1Q9BTT6 524 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 WASF3Q9UPY6 502 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 CHMP2BQ9UQN3 213 aa16.45■□□□□ 0.22
CAPN12-206ENST00000597354 SPEGQ15772 3267 aa16.44■□□□□ 0.22
CAPN12-206ENST00000597354 ZCWPW2A0A1B0GU75 182 aa16.44■□□□□ 0.22
CAPN12-206ENST00000597354 B4GAT1O43505 415 aa16.44■□□□□ 0.22
CAPN12-206ENST00000597354 NUDT21O43809 227 aaKnown RBP16.44■□□□□ 0.22
CAPN12-206ENST00000597354 MT-CO3P00414 261 aa16.44■□□□□ 0.22
CAPN12-206ENST00000597354 JUPP14923 745 aa16.44■□□□□ 0.22
CAPN12-206ENST00000597354 ELK3P41970 407 aa16.44■□□□□ 0.22
CAPN12-206ENST00000597354 DMPKQ09013 629 aa16.44■□□□□ 0.22
CAPN12-206ENST00000597354 BRD3Q15059 726 aa16.44■□□□□ 0.22
CAPN12-206ENST00000597354 AMZ1Q400G9 498 aa16.44■□□□□ 0.22
CAPN12-206ENST00000597354 AARS2Q5JTZ9 985 aaKnown RBP16.44■□□□□ 0.22
CAPN12-206ENST00000597354 DUPD1Q68J44 220 aa16.44■□□□□ 0.22
CAPN12-206ENST00000597354 C8orf74Q6P047 294 aa16.44■□□□□ 0.22
CAPN12-206ENST00000597354 XKR5Q6UX68 686 aa16.44■□□□□ 0.22
CAPN12-206ENST00000597354 TMPRSS7Q7RTY8 843 aa16.44■□□□□ 0.22
CAPN12-206ENST00000597354 TMEM135Q86UB9 458 aa16.44■□□□□ 0.22
CAPN12-206ENST00000597354 CCNJLQ8IV13 435 aa16.44■□□□□ 0.22
CAPN12-206ENST00000597354 ANKMY2Q8IV38 441 aa16.44■□□□□ 0.22
CAPN12-206ENST00000597354 CFAP36Q96G28 342 aa16.44■□□□□ 0.22
CAPN12-206ENST00000597354 LINC00615Q96LM1 132 aaPredicted RBP16.44■□□□□ 0.22
CAPN12-206ENST00000597354 EBNA1BP2Q99848 306 aaKnown RBP16.44■□□□□ 0.22
CAPN12-206ENST00000597354 CCM2Q9BSQ5 444 aa16.44■□□□□ 0.22
CAPN12-206ENST00000597354 WWP1Q9H0M0 922 aa16.44■□□□□ 0.22
CAPN12-206ENST00000597354 C20orf96Q9NUD7 363 aaPredicted RBP16.44■□□□□ 0.22
CAPN12-206ENST00000597354 ZNF624Q9P2J8 865 aaPredicted RBP16.44■□□□□ 0.22
CAPN12-206ENST00000597354 CPNE7Q9UBL6 633 aa16.44■□□□□ 0.22
CAPN12-206ENST00000597354 ATXN7L1Q9ULK2 861 aaPredicted RBP16.44■□□□□ 0.22
CAPN12-206ENST00000597354 UTP11Q9Y3A2 253 aaKnown RBP16.44■□□□□ 0.22
CAPN12-206ENST00000597354 CFAP20Q9Y6A4 193 aaKnown RBP16.44■□□□□ 0.22
CAPN12-206ENST00000597354 PIKFYVEQ9Y2I7 2098 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 A0A1W2PQM1 296 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 UBA6A0AVT1 1052 aaPredicted RBP16.43■□□□□ 0.22
CAPN12-206ENST00000597354 IQCF5A8MTL0 148 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 KCNJ13O60928 360 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 NDUFS3O75489 264 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 USP1O94782 785 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 AP2A2O94973 939 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 CDK4P11802 303 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 SLC2A4P14672 509 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 PGAM1P18669 254 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 PPARGP37231 505 aaPredicted RBP16.43■□□□□ 0.22
CAPN12-206ENST00000597354 SLC19A1P41440 591 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 PPM1FP49593 454 aaPredicted RBP16.43■□□□□ 0.22
CAPN12-206ENST00000597354 TTPAP49638 278 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 CSE1LP55060 971 aaKnown RBP16.43■□□□□ 0.22
CAPN12-206ENST00000597354 ARL4CP56559 192 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 HHEXQ03014 270 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 PDIA2Q13087 525 aaKnown RBP16.43■□□□□ 0.22
CAPN12-206ENST00000597354 CALCOCO2Q13137 446 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 THOC5Q13769 683 aaKnown RBP16.43■□□□□ 0.22
CAPN12-206ENST00000597354 HIF1AQ16665 826 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 NKAIN2Q5VXU1 208 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 METRNLQ641Q3 311 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 NEPROQ6NW34 567 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 ABRAXAS1Q6UWZ7 409 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 PACS1Q6VY07 963 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 SPRED1Q7Z699 444 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 SDCCAG8Q86SQ7 713 aaPredicted RBP16.43■□□□□ 0.22
CAPN12-206ENST00000597354 SLC9B2Q86UD5 537 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 TRIM48Q8IWZ4 208 aa16.43■□□□□ 0.22
CAPN12-206ENST00000597354 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.43■□□□□ 0.22
CAPN12-206ENST00000597354 NOA1Q8NC60 698 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms