RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 GLIS1Q8NBF1 620 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 AGBL5Q8NDL9 886 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 OR2L2Q8NH16 312 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 SNRNP27Q8WVK2 155 aaKnown RBP12.81□□□□□ -0.36
USE1-207ENST00000596136 SGF29Q96ES7 293 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 CRELD1Q96HD1 420 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 AHCYL2Q96HN2 611 aaKnown RBP12.81□□□□□ -0.36
USE1-207ENST00000596136 TBC1D10AQ9BXI6 508 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 OGFRQ9NZT2 677 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 AKAP7Q9P0M2 348 aaPredicted RBP12.81□□□□□ -0.36
USE1-207ENST00000596136 PAK5Q9P286 719 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 PISDQ9UG56 409 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 WDR37Q9Y2I8 494 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 PCDHGA3Q9Y5H0 932 aa12.81□□□□□ -0.36
USE1-207ENST00000596136 OR52A4PA6NMU1 304 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 B4E171 279 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 C9orf172C9J069 976 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.8□□□□□ -0.36
USE1-207ENST00000596136 VIPP01282 170 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 C9P02748 559 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 FGF3P11487 239 aaPredicted RBP12.8□□□□□ -0.36
USE1-207ENST00000596136 CCL4P13236 92 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 ATP1B2P14415 290 aaPredicted RBP12.8□□□□□ -0.36
USE1-207ENST00000596136 ETS1P14921 441 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 CD82P27701 267 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 AKT1P31749 480 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 MC4RP32245 332 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 RPL22P35268 128 aaKnown RBP12.8□□□□□ -0.36
USE1-207ENST00000596136 TSPAN7P41732 249 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 DRG2P55039 364 aaKnown RBP12.8□□□□□ -0.36
USE1-207ENST00000596136 UCNP55089 124 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 TMPRSS15P98073 1019 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 CLN3Q13286 438 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 SNX1Q13596 522 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 POU6F1Q14863 301 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 SKIDA1Q1XH10 827 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 ZNF658BQ4V348 819 aaPredicted RBP12.8□□□□□ -0.36
USE1-207ENST00000596136 FNBP1LQ5T0N5 605 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 C4orf22Q6V702 233 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 TAB3Q8N5C8 712 aaPredicted RBP12.8□□□□□ -0.36
USE1-207ENST00000596136 RCBTB1Q8NDN9 531 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 OR52K1Q8NGK4 314 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 NCSTNQ92542 709 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 RANBP9Q96S59 729 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 COPS8Q99627 209 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 CASS4Q9NQ75 786 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 HOMER3Q9NSC5 361 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 ZDHHC3Q9NYG2 299 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 CRLS1Q9UJA2 301 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 RALYQ9UKM9 306 aaKnown RBP12.8□□□□□ -0.36
USE1-207ENST00000596136 ACSL5Q9ULC5 683 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 JRKLQ9Y4A0 524 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 SLC30A1Q9Y6M5 507 aa12.8□□□□□ -0.36
USE1-207ENST00000596136 MN1Q10571 1320 aaPredicted RBP12.8□□□□□ -0.36
USE1-207ENST00000596136 SMG1Q96Q15 3661 aaKnown RBP12.8□□□□□ -0.36
USE1-207ENST00000596136 C17orf113A0A1B0GUU1 675 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 GOLGA6L3A6NEY3 463 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 CCL22O00626 93 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 ANKRD34CP0C6C1 535 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 RALBP11234 206 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 ACRV1P26436 265 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 CSTF2P33240 577 aaKnown RBP eCLIP12.79□□□□□ -0.36
USE1-207ENST00000596136 GRIA1P42261 906 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 HALP42357 657 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 PRLHRP49683 370 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 CDKN1CP49918 316 aaPredicted RBP12.79□□□□□ -0.36
USE1-207ENST00000596136 ARSDP51689 593 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 ACVR1Q04771 509 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 CACNG1Q06432 222 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 LAMB3Q13751 1172 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 NFE2L1Q14494 772 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 SEPT7Q16181 437 aaKnown RBP12.79□□□□□ -0.36
USE1-207ENST00000596136 RPE65Q16518 533 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 BROXQ5VW32 411 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 PRUNE1Q86TP1 453 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 SERPINA9Q86WD7 417 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 DTX1Q86Y01 620 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 PLXDC1Q8IUK5 500 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 TRIM48Q8IWZ4 208 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 REXO1L1PQ8IX06 675 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 PIANPQ8IYJ0 282 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 RASGEF1CQ8N431 466 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 BEND7Q8N7W2 519 aaPredicted RBP12.79□□□□□ -0.36
USE1-207ENST00000596136 BMPERQ8N8U9 685 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 PRELID2Q8N945 189 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 CCDC89Q8N998 374 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 OR13J1Q8NGT2 312 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 ZFPM2Q8WW38 1151 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 PEX13Q92968 403 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 USP7Q93009 1102 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 NAF1Q96HR8 494 aaKnown RBP12.79□□□□□ -0.36
USE1-207ENST00000596136 SGSM3Q96HU1 749 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 TAAR9Q96RI9 348 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 RAB33BQ9H082 229 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 FAM96AQ9H5X1 160 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 EIF2B3Q9NR50 452 aaKnown RBP12.79□□□□□ -0.36
USE1-207ENST00000596136 RAB6BQ9NRW1 208 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 EPHA6Q9UF33 1036 aa12.79□□□□□ -0.36
USE1-207ENST00000596136 TTC7AQ9ULT0 858 aaPredicted RBP12.79□□□□□ -0.36
USE1-207ENST00000596136 SDK2Q58EX2 2172 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms