RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 JAK1P23458 1154 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 MTHFRP42898 656 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 PLA2G16P53816 162 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 ZNF235Q14590 738 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 TRIP4Q15650 581 aaPredicted RBP13.09□□□□□ -0.31
VRK3-209ENST00000594948 GALNT18Q6P9A2 607 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 FRA10AC1Q70Z53 315 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 CHST15Q7LFX5 561 aaPredicted RBP13.09□□□□□ -0.31
VRK3-209ENST00000594948 R3HCC1LQ7Z5L2 792 aaKnown RBP13.09□□□□□ -0.31
VRK3-209ENST00000594948 NECAB2Q7Z6G3 386 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 STK32CQ86UX6 486 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 ANKRD13BQ86YJ7 626 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 PARP8Q8N3A8 854 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 FNDC5Q8NAU1 212 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 CHDHQ8NE62 594 aaPredicted RBP13.09□□□□□ -0.31
VRK3-209ENST00000594948 GIPC2Q8TF65 315 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 C8orf48Q96LL4 319 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 RBM4BQ9BQ04 359 aaKnown RBP13.09□□□□□ -0.31
VRK3-209ENST00000594948 RBM4Q9BWF3 364 aaKnown RBP13.09□□□□□ -0.31
VRK3-209ENST00000594948 RETREG1Q9H6L5 497 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 PDFQ9HBH1 243 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 NUDT4Q9NZJ9 180 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 ENPP5Q9UJA9 477 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 USP22Q9UPT9 525 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 PDE10AQ9Y233 779 aa13.09□□□□□ -0.31
VRK3-209ENST00000594948 TTC3P53804 2025 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 SCN10AQ9Y5Y9 1956 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 CCL15-CCL14A0A0B4J2E2 113 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 UBA6A0AVT1 1052 aaPredicted RBP13.08□□□□□ -0.32
VRK3-209ENST00000594948 NPEPPSL1A6NEC2 478 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 G3V2T6 193 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 GPR182O15218 404 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 RSL1D1O76021 490 aaKnown RBP13.08□□□□□ -0.32
VRK3-209ENST00000594948 UGT2B4P06133 528 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 PKMP14618 531 aaKnown RBP13.08□□□□□ -0.32
VRK3-209ENST00000594948 PRDX3P30048 256 aaKnown RBP13.08□□□□□ -0.32
VRK3-209ENST00000594948 FMO4P31512 558 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 CASP2P42575 452 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 CLCN4P51793 760 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 PPP2R2BQ00005 443 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 TAF1AQ15573 450 aaPredicted RBP13.08□□□□□ -0.32
VRK3-209ENST00000594948 CCL15Q16663 113 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 ZIK1Q3SY52 487 aaPredicted RBP13.08□□□□□ -0.32
VRK3-209ENST00000594948 SULT1C3Q6IMI6 304 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 FBXL22Q6P050 247 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 RNF165Q6ZSG1 346 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 Q6ZSR9 355 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 IGFN1Q86VF2 1251 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 GPSM1Q86YR5 675 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 CARNMT1Q8N4J0 409 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 S100ZQ8WXG8 99 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 ZNF566Q969W8 418 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 FUBP3Q96I24 572 aaKnown RBP eCLIP13.08□□□□□ -0.32
VRK3-209ENST00000594948 MBOAT4Q96T53 435 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 CSF3RQ99062 836 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 GPR21Q99679 349 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 NEURL2Q9BR09 285 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 WDR12Q9GZL7 423 aaKnown RBP13.08□□□□□ -0.32
VRK3-209ENST00000594948 TOR3AQ9H497 397 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 MAGIXQ9H6Y5 334 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 OLA1Q9NTK5 396 aaKnown RBP13.08□□□□□ -0.32
VRK3-209ENST00000594948 SELENONQ9NZV5 590 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 NUDT5Q9UKK9 219 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 PCDHGB1Q9Y5G3 927 aa13.08□□□□□ -0.32
VRK3-209ENST00000594948 ANKRD12Q6UB98 2062 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 CLDN25C9JDP6 229 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 BTN3A1O00481 513 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 ANKRD28O15084 1053 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 OR4F21O95013 312 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 SCELO95171 688 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 TSPAN12O95859 305 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 MT-ND1P03886 318 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 ALDH2P05091 517 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 IL1RNP18510 177 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 MSH3P20585 1137 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 PURAQ00577 322 aaKnown RBP13.07□□□□□ -0.32
VRK3-209ENST00000594948 GALNT3Q14435 633 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 PTPRCAPQ14761 206 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 RFX4Q33E94 735 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 ZC3H12BQ5HYM0 836 aaKnown RBP13.07□□□□□ -0.32
VRK3-209ENST00000594948 PRAMEF19Q5SWL8 479 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 NEK10Q6ZWH5 1172 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 PIK3C3Q8NEB9 887 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 PDZD8Q8NEN9 1154 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 ABHD11Q8NFV4 315 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 IGSF8Q969P0 613 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 VMP1Q96GC9 406 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 RPL10LQ96L21 214 aaKnown RBP13.07□□□□□ -0.32
VRK3-209ENST00000594948 ZNF583Q96ND8 569 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 MGME1Q9BQP7 344 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 MROQ9BYG7 248 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 HMG20AQ9NP66 347 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 IL37Q9NZH6 218 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 ARIH1Q9Y4X5 557 aaPredicted RBP13.07□□□□□ -0.32
VRK3-209ENST00000594948 NEUROG3Q9Y4Z2 214 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 CORINQ9Y5Q5 1042 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 SNX5Q9Y5X3 404 aa13.07□□□□□ -0.32
VRK3-209ENST00000594948 B4GAT1O43505 415 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 KCNH1O95259 989 aa13.06□□□□□ -0.32
VRK3-209ENST00000594948 IGLV3-27P01718 113 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms