RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 MSH3P20585 1137 aa23.05■■□□□ 1.28
LSM4-204ENST00000594828 IL22RA1Q8N6P7 574 aa23.05■■□□□ 1.28
LSM4-204ENST00000594828 TTC13Q8NBP0 860 aa23.05■■□□□ 1.28
LSM4-204ENST00000594828 RTP4Q96DX8 246 aa23.05■■□□□ 1.28
LSM4-204ENST00000594828 CTRCQ99895 268 aa23.05■■□□□ 1.28
LSM4-204ENST00000594828 SEMA4CQ9C0C4 833 aa23.05■■□□□ 1.28
LSM4-204ENST00000594828 PACSIN2Q9UNF0 486 aaPredicted RBP23.05■■□□□ 1.28
LSM4-204ENST00000594828 KCTD3Q9Y597 815 aa23.05■■□□□ 1.28
LSM4-204ENST00000594828 MN1Q10571 1320 aaPredicted RBP23.05■■□□□ 1.28
LSM4-204ENST00000594828 CRTAMO95727 393 aa23.04■■□□□ 1.28
LSM4-204ENST00000594828 C9P02748 559 aa23.04■■□□□ 1.28
LSM4-204ENST00000594828 ANKRD34CP0C6C1 535 aa23.04■■□□□ 1.28
LSM4-204ENST00000594828 AKT1P31749 480 aa23.04■■□□□ 1.28
LSM4-204ENST00000594828 GFERP55789 205 aa23.04■■□□□ 1.28
LSM4-204ENST00000594828 PDE1BQ01064 536 aa23.04■■□□□ 1.28
LSM4-204ENST00000594828 DMPKQ09013 629 aa23.04■■□□□ 1.28
LSM4-204ENST00000594828 LONRF2Q1L5Z9 754 aa23.04■■□□□ 1.28
LSM4-204ENST00000594828 CEACAM20Q6UY09 585 aa23.04■■□□□ 1.28
LSM4-204ENST00000594828 SPC24Q8NBT2 197 aa23.04■■□□□ 1.28
LSM4-204ENST00000594828 LRRC45Q96CN5 670 aa23.04■■□□□ 1.28
LSM4-204ENST00000594828 ZNF514Q96K75 400 aaPredicted RBP23.04■■□□□ 1.28
LSM4-204ENST00000594828 C9orf72Q96LT7 481 aa23.04■■□□□ 1.28
LSM4-204ENST00000594828 ZPBPQ9BS86 351 aa23.04■■□□□ 1.28
LSM4-204ENST00000594828 DESI2Q9BSY9 194 aa23.04■■□□□ 1.28
LSM4-204ENST00000594828 ASB8Q9H765 288 aa23.04■■□□□ 1.28
LSM4-204ENST00000594828 SDK2Q58EX2 2172 aa23.03■■□□□ 1.28
LSM4-204ENST00000594828 A0A0U1RQJ8 604 aa23.03■■□□□ 1.28
LSM4-204ENST00000594828 CAPN5O15484 640 aaPredicted RBP23.03■■□□□ 1.28
LSM4-204ENST00000594828 SRP72O76094 671 aaKnown RBP23.03■■□□□ 1.28
LSM4-204ENST00000594828 FTCDO95954 541 aa23.03■■□□□ 1.28
LSM4-204ENST00000594828 WT1P19544 449 aaPredicted RBP23.03■■□□□ 1.28
LSM4-204ENST00000594828 MSLNQ13421 630 aaPredicted RBP23.03■■□□□ 1.28
LSM4-204ENST00000594828 GPR18Q14330 331 aa23.03■■□□□ 1.28
LSM4-204ENST00000594828 SPARCL1Q14515 664 aa23.03■■□□□ 1.28
LSM4-204ENST00000594828 FNBP1LQ5T0N5 605 aa23.03■■□□□ 1.28
LSM4-204ENST00000594828 ZNF605Q86T29 641 aa23.03■■□□□ 1.28
LSM4-204ENST00000594828 CACNA2D3Q8IZS8 1091 aa23.03■■□□□ 1.28
LSM4-204ENST00000594828 MED8Q96G25 268 aa23.03■■□□□ 1.28
LSM4-204ENST00000594828 TGM7Q96PF1 710 aa23.03■■□□□ 1.28
LSM4-204ENST00000594828 TBL1YQ9BQ87 522 aa23.03■■□□□ 1.28
LSM4-204ENST00000594828 FKBPLQ9UIM3 349 aa23.03■■□□□ 1.28
LSM4-204ENST00000594828 PILRAQ9UKJ1 303 aa23.03■■□□□ 1.28
LSM4-204ENST00000594828 TOX3O15405 576 aaPredicted RBP23.02■■□□□ 1.28
LSM4-204ENST00000594828 RAD1O60671 282 aa23.02■■□□□ 1.28
LSM4-204ENST00000594828 ITGB2P05107 769 aa23.02■■□□□ 1.28
LSM4-204ENST00000594828 CDC25BP30305 580 aa23.02■■□□□ 1.28
LSM4-204ENST00000594828 NFE2L1Q14494 772 aa23.02■■□□□ 1.28
LSM4-204ENST00000594828 FAM83HQ6ZRV2 1179 aaPredicted RBP23.02■■□□□ 1.28
LSM4-204ENST00000594828 ARHGEF18Q6ZSZ5 1173 aa23.02■■□□□ 1.28
LSM4-204ENST00000594828 DET1Q7L5Y6 550 aa23.02■■□□□ 1.28
LSM4-204ENST00000594828 BEND7Q8N7W2 519 aaPredicted RBP23.02■■□□□ 1.28
LSM4-204ENST00000594828 SPRY4Q9C004 299 aa23.02■■□□□ 1.28
LSM4-204ENST00000594828 ARNT2Q9HBZ2 717 aa23.02■■□□□ 1.28
LSM4-204ENST00000594828 APMAPQ9HDC9 416 aa23.02■■□□□ 1.28
LSM4-204ENST00000594828 FEZ2Q9UHY8 353 aaPredicted RBP23.02■■□□□ 1.28
LSM4-204ENST00000594828 PSMD13Q9UNM6 376 aa23.02■■□□□ 1.28
LSM4-204ENST00000594828 POLR1CO15160 346 aaPredicted RBP23.01■■□□□ 1.27
LSM4-204ENST00000594828 DDX3YO15523 660 aaKnown RBP23.01■■□□□ 1.27
LSM4-204ENST00000594828 PBLDP30039 288 aaPredicted RBP23.01■■□□□ 1.27
LSM4-204ENST00000594828 LEPRP48357 1165 aaKnown RBP23.01■■□□□ 1.27
LSM4-204ENST00000594828 XIAPP98170 497 aa23.01■■□□□ 1.27
LSM4-204ENST00000594828 RPE65Q16518 533 aa23.01■■□□□ 1.27
LSM4-204ENST00000594828 PARP6Q2NL67 630 aa23.01■■□□□ 1.27
LSM4-204ENST00000594828 LINC00303Q3SY05 128 aa23.01■■□□□ 1.27
LSM4-204ENST00000594828 METRNLQ641Q3 311 aa23.01■■□□□ 1.27
LSM4-204ENST00000594828 DENND5AQ6IQ26 1287 aa23.01■■□□□ 1.27
LSM4-204ENST00000594828 FAM71DQ8N9W8 422 aa23.01■■□□□ 1.27
LSM4-204ENST00000594828 OR13C4Q8NGS5 318 aa23.01■■□□□ 1.27
LSM4-204ENST00000594828 RSC1A1Q92681 617 aa23.01■■□□□ 1.27
LSM4-204ENST00000594828 EXTL1Q92935 676 aa23.01■■□□□ 1.27
LSM4-204ENST00000594828 ARHGAP9Q9BRR9 750 aa23.01■■□□□ 1.27
LSM4-204ENST00000594828 MGAT4DA6NG13 374 aa23■■□□□ 1.27
LSM4-204ENST00000594828 RASSF9O75901 435 aa23■■□□□ 1.27
LSM4-204ENST00000594828 HADHAP40939 763 aa23■■□□□ 1.27
LSM4-204ENST00000594828 CAPZBP47756 277 aa23■■□□□ 1.27
LSM4-204ENST00000594828 SEPHS1P49903 392 aa23■■□□□ 1.27
LSM4-204ENST00000594828 CYP4F2P78329 520 aa23■■□□□ 1.27
LSM4-204ENST00000594828 TMPRSS15P98073 1019 aa23■■□□□ 1.27
LSM4-204ENST00000594828 KLF1Q13351 362 aaPredicted RBP23■■□□□ 1.27
LSM4-204ENST00000594828 XKR5Q6UX68 686 aa23■■□□□ 1.27
LSM4-204ENST00000594828 KLHDC8BQ8IXV7 354 aa23■■□□□ 1.27
LSM4-204ENST00000594828 NLGN4XQ8N0W4 816 aa23■■□□□ 1.27
LSM4-204ENST00000594828 NLGN4YQ8NFZ3 816 aaPredicted RBP23■■□□□ 1.27
LSM4-204ENST00000594828 ZDHHC12Q96GR4 267 aa23■■□□□ 1.27
LSM4-204ENST00000594828 C19orf43Q9BQ61 176 aa23■■□□□ 1.27
LSM4-204ENST00000594828 CRLS1Q9UJA2 301 aa23■■□□□ 1.27
LSM4-204ENST00000594828 ATMQ13315 3056 aa23■■□□□ 1.27
LSM4-204ENST00000594828 FASNP49327 2511 aaKnown RBP23■■□□□ 1.27
LSM4-204ENST00000594828 BAHCC1Q9P281 2608 aa22.99■■□□□ 1.27
LSM4-204ENST00000594828 AGAP14A8MT82 685 aa22.99■■□□□ 1.27
LSM4-204ENST00000594828 RALBP11234 206 aa22.99■■□□□ 1.27
LSM4-204ENST00000594828 LIFP15018 202 aa22.99■■□□□ 1.27
LSM4-204ENST00000594828 MAP4P27816 1152 aaKnown RBP22.99■■□□□ 1.27
LSM4-204ENST00000594828 FOXM1Q08050 763 aa22.99■■□□□ 1.27
LSM4-204ENST00000594828 GPR150Q8NGU9 434 aa22.99■■□□□ 1.27
LSM4-204ENST00000594828 OR2L2Q8NH16 312 aa22.99■■□□□ 1.27
LSM4-204ENST00000594828 ULK4Q96C45 1275 aa22.99■■□□□ 1.27
LSM4-204ENST00000594828 DCUN1D1Q96GG9 259 aa22.99■■□□□ 1.27
LSM4-204ENST00000594828 HES6Q96HZ4 224 aa22.99■■□□□ 1.27
LSM4-204ENST00000594828 SLC12A9Q9BXP2 914 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms