RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 MFAP3LO75121 409 aa23.44■■□□□ 1.34
LSM4-202ENST00000593564 POP7O75817 140 aaKnown RBP23.44■■□□□ 1.34
LSM4-202ENST00000593564 MT-ND3P03897 115 aa23.44■■□□□ 1.34
LSM4-202ENST00000593564 CCNYL3P0C7X3 344 aa23.44■■□□□ 1.34
LSM4-202ENST00000593564 FECHP22830 423 aa23.44■■□□□ 1.34
LSM4-202ENST00000593564 CTSCP53634 463 aa23.44■■□□□ 1.34
LSM4-202ENST00000593564 CHRNA6Q15825 494 aa23.44■■□□□ 1.34
LSM4-202ENST00000593564 LDLRAP1Q5SW96 308 aa23.44■■□□□ 1.34
LSM4-202ENST00000593564 VSTM4Q8IW00 320 aa23.44■■□□□ 1.34
LSM4-202ENST00000593564 SLC25A41Q8N5S1 370 aa23.44■■□□□ 1.34
LSM4-202ENST00000593564 RASGEF1AQ8N9B8 481 aa23.44■■□□□ 1.34
LSM4-202ENST00000593564 DDHD1Q8NEL9 900 aa23.44■■□□□ 1.34
LSM4-202ENST00000593564 UBXN4Q92575 508 aa23.44■■□□□ 1.34
LSM4-202ENST00000593564 SLC41A2Q96JW4 573 aa23.44■■□□□ 1.34
LSM4-202ENST00000593564 MRGPRX2Q96LB1 330 aa23.44■■□□□ 1.34
LSM4-202ENST00000593564 FCRL5Q96RD9 977 aa23.44■■□□□ 1.34
LSM4-202ENST00000593564 PCDHGA6Q9Y5G7 932 aa23.44■■□□□ 1.34
LSM4-202ENST00000593564 DNMT3AQ9Y6K1 912 aaPredicted RBP23.44■■□□□ 1.34
LSM4-202ENST00000593564 DOPEY2Q9Y3R5 2298 aa23.44■■□□□ 1.34
LSM4-202ENST00000593564 PSTPIP1O43586 416 aa23.43■■□□□ 1.34
LSM4-202ENST00000593564 CHRNA4P43681 627 aa23.43■■□□□ 1.34
LSM4-202ENST00000593564 PPP1CAP62136 330 aa23.43■■□□□ 1.34
LSM4-202ENST00000593564 ERV3-1Q14264 604 aa23.43■■□□□ 1.34
LSM4-202ENST00000593564 RPE65Q16518 533 aa23.43■■□□□ 1.34
LSM4-202ENST00000593564 KLHL35Q6PF15 583 aa23.43■■□□□ 1.34
LSM4-202ENST00000593564 FAM151BQ6UXP7 276 aa23.43■■□□□ 1.34
LSM4-202ENST00000593564 SPOCD1Q6ZMY3 1216 aa23.43■■□□□ 1.34
LSM4-202ENST00000593564 GLT6D1Q7Z4J2 308 aa23.43■■□□□ 1.34
LSM4-202ENST00000593564 GPR150Q8NGU9 434 aa23.43■■□□□ 1.34
LSM4-202ENST00000593564 OXNAD1Q96HP4 312 aaPredicted RBP23.43■■□□□ 1.34
LSM4-202ENST00000593564 VAT1Q99536 393 aa23.43■■□□□ 1.34
LSM4-202ENST00000593564 PDE7BQ9NP56 450 aa23.43■■□□□ 1.34
LSM4-202ENST00000593564 KLHL8Q9P2G9 620 aaPredicted RBP23.43■■□□□ 1.34
LSM4-202ENST00000593564 PADI1Q9ULC6 663 aa23.43■■□□□ 1.34
LSM4-202ENST00000593564 POLHQ9Y253 713 aa23.43■■□□□ 1.34
LSM4-202ENST00000593564 IGHV5-51A0A0C4DH38 117 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 GLYATL1P3A0A0U1RQE8 302 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 GPR39O43194 453 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 UGT1A9O60656 530 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 KATNA1O75449 491 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 RECKO95980 971 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 FURINP09958 794 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 UGT1A6P19224 532 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 HLA-DPA1P20036 260 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 UGT1A1P22309 533 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 UGT1A4P22310 534 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 SRSF1Q07955 248 aaKnown RBP eCLIP23.42■■□□□ 1.34
LSM4-202ENST00000593564 ITGA9Q13797 1035 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 SLC1A5Q15758 541 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 IGFBP7Q16270 282 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 PPP2R5EQ16537 467 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 KAZNQ674X7 775 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 FAM83HQ6ZRV2 1179 aaPredicted RBP23.42■■□□□ 1.34
LSM4-202ENST00000593564 BLOC1S5Q8TDH9 187 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 P3H4Q92791 437 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 FCRL4Q96PJ5 515 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 UGT1A7Q9HAW7 530 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 UGT1A10Q9HAW8 530 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 UGT1A8Q9HAW9 530 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 LHX9Q9NQ69 397 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 SMOXQ9NWM0 555 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 TP53TG5Q9Y2B4 290 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 PKP3Q9Y446 797 aa23.42■■□□□ 1.34
LSM4-202ENST00000593564 MKRN2OSH3BPM6 223 aa23.41■■□□□ 1.34
LSM4-202ENST00000593564 GAPDHSO14556 408 aaPredicted RBP23.41■■□□□ 1.34
LSM4-202ENST00000593564 ADCY2Q08462 1091 aa23.41■■□□□ 1.34
LSM4-202ENST00000593564 KLRB1Q12918 225 aa23.41■■□□□ 1.34
LSM4-202ENST00000593564 MPP3Q13368 585 aa23.41■■□□□ 1.34
LSM4-202ENST00000593564 TUBB3Q13509 450 aa23.41■■□□□ 1.34
LSM4-202ENST00000593564 DNASE1L3Q13609 305 aa23.41■■□□□ 1.34
LSM4-202ENST00000593564 LLGL1Q15334 1064 aa23.41■■□□□ 1.34
LSM4-202ENST00000593564 GPRC6AQ5T6X5 926 aa23.41■■□□□ 1.34
LSM4-202ENST00000593564 PID1Q7Z2X4 250 aa23.41■■□□□ 1.34
LSM4-202ENST00000593564 ZC3H18Q86VM9 953 aaKnown RBP23.41■■□□□ 1.34
LSM4-202ENST00000593564 ZNF567Q8N184 647 aa23.41■■□□□ 1.34
LSM4-202ENST00000593564 SIDT2Q8NBJ9 832 aaKnown RBP23.41■■□□□ 1.34
LSM4-202ENST00000593564 IPMKQ8NFU5 416 aa23.41■■□□□ 1.34
LSM4-202ENST00000593564 RARRES3Q9UL19 164 aa23.41■■□□□ 1.34
LSM4-202ENST00000593564 OR2AG2A6NM03 316 aa23.4■■□□□ 1.34
LSM4-202ENST00000593564 C21orf140B9A014 251 aa23.4■■□□□ 1.34
LSM4-202ENST00000593564 CREG1O75629 220 aa23.4■■□□□ 1.34
LSM4-202ENST00000593564 TIAF1O95411 115 aa23.4■■□□□ 1.34
LSM4-202ENST00000593564 FOLR1P15328 257 aa23.4■■□□□ 1.34
LSM4-202ENST00000593564 CA5AP35218 305 aa23.4■■□□□ 1.34
LSM4-202ENST00000593564 NFE2L1Q14494 772 aa23.4■■□□□ 1.34
LSM4-202ENST00000593564 TFDP3Q5H9I0 405 aa23.4■■□□□ 1.34
LSM4-202ENST00000593564 TCTN3Q6NUS6 607 aa23.4■■□□□ 1.34
LSM4-202ENST00000593564 TMEM220Q6QAJ8 160 aa23.4■■□□□ 1.34
LSM4-202ENST00000593564 BPHLQ86WA6 291 aaPredicted RBP23.4■■□□□ 1.34
LSM4-202ENST00000593564 KMT5CQ86Y97 462 aa23.4■■□□□ 1.34
LSM4-202ENST00000593564 CT55Q8WUE5 264 aa23.4■■□□□ 1.34
LSM4-202ENST00000593564 ZNF514Q96K75 400 aaPredicted RBP23.4■■□□□ 1.34
LSM4-202ENST00000593564 QKIQ96PU8 341 aaKnown RBP eCLIP23.4■■□□□ 1.34
LSM4-202ENST00000593564 CD180Q99467 661 aa23.4■■□□□ 1.34
LSM4-202ENST00000593564 PSMD13Q9UNM6 376 aa23.4■■□□□ 1.34
LSM4-202ENST00000593564 hCG_1818297A0A087WSY0 165 aa23.39■■□□□ 1.33
LSM4-202ENST00000593564 CDC14CA4D256 554 aa23.39■■□□□ 1.33
LSM4-202ENST00000593564 F5H423 210 aaPredicted RBP23.39■■□□□ 1.33
LSM4-202ENST00000593564 BUD23O43709 281 aaKnown RBP23.39■■□□□ 1.33
LSM4-202ENST00000593564 MTHFD1P11586 935 aaKnown RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms