RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 IL11RAQ14626 422 aa20.07■□□□□ 0.8
TRIM47-207ENST00000593089 SLC1A5Q15758 541 aa20.07■□□□□ 0.8
TRIM47-207ENST00000593089 TFDP3Q5H9I0 405 aa20.07■□□□□ 0.8
TRIM47-207ENST00000593089 LDLRAP1Q5SW96 308 aa20.07■□□□□ 0.8
TRIM47-207ENST00000593089 CNGA4Q8IV77 575 aa20.07■□□□□ 0.8
TRIM47-207ENST00000593089 CCDC50Q8IVM0 306 aa20.07■□□□□ 0.8
TRIM47-207ENST00000593089 GPR150Q8NGU9 434 aa20.07■□□□□ 0.8
TRIM47-207ENST00000593089 KLHL6Q8WZ60 621 aa20.07■□□□□ 0.8
TRIM47-207ENST00000593089 COL26A1Q96A83 441 aa20.07■□□□□ 0.8
TRIM47-207ENST00000593089 ZCCHC2Q9C0B9 1178 aaKnown RBP20.07■□□□□ 0.8
TRIM47-207ENST00000593089 EPN3Q9H201 632 aa20.07■□□□□ 0.8
TRIM47-207ENST00000593089 HACD3Q9P035 362 aa20.07■□□□□ 0.8
TRIM47-207ENST00000593089 LNPEPQ9UIQ6 1025 aa20.07■□□□□ 0.8
TRIM47-207ENST00000593089 hCG_1818297A0A087WSY0 165 aa20.06■□□□□ 0.8
TRIM47-207ENST00000593089 CYSRT1A8MQ03 144 aa20.06■□□□□ 0.8
TRIM47-207ENST00000593089 AKR1B15C9JRZ8 316 aaPredicted RBP20.06■□□□□ 0.8
TRIM47-207ENST00000593089 KCNJ13O60928 360 aa20.06■□□□□ 0.8
TRIM47-207ENST00000593089 SPAG6O75602 509 aa20.06■□□□□ 0.8
TRIM47-207ENST00000593089 EPOP01588 193 aa20.06■□□□□ 0.8
TRIM47-207ENST00000593089 PBLDP30039 288 aaPredicted RBP20.06■□□□□ 0.8
TRIM47-207ENST00000593089 MPP3Q13368 585 aa20.06■□□□□ 0.8
TRIM47-207ENST00000593089 RPE65Q16518 533 aa20.06■□□□□ 0.8
TRIM47-207ENST00000593089 GPRC6AQ5T6X5 926 aa20.06■□□□□ 0.8
TRIM47-207ENST00000593089 TMEM220Q6QAJ8 160 aa20.06■□□□□ 0.8
TRIM47-207ENST00000593089 FAM83HQ6ZRV2 1179 aaPredicted RBP20.06■□□□□ 0.8
TRIM47-207ENST00000593089 RNF214Q8ND24 703 aa20.06■□□□□ 0.8
TRIM47-207ENST00000593089 DDHD1Q8NEL9 900 aa20.06■□□□□ 0.8
TRIM47-207ENST00000593089 DTX3LQ8TDB6 740 aa20.06■□□□□ 0.8
TRIM47-207ENST00000593089 ABHD17AQ96GS6 310 aa20.06■□□□□ 0.8
TRIM47-207ENST00000593089 VAT1Q99536 393 aa20.06■□□□□ 0.8
TRIM47-207ENST00000593089 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.06■□□□□ 0.8
TRIM47-207ENST00000593089 EPHA6Q9UF33 1036 aa20.06■□□□□ 0.8
TRIM47-207ENST00000593089 RSPH14Q9UHP6 348 aa20.06■□□□□ 0.8
TRIM47-207ENST00000593089 PKP3Q9Y446 797 aa20.06■□□□□ 0.8
TRIM47-207ENST00000593089 PCDHB3Q9Y5E6 796 aa20.06■□□□□ 0.8
TRIM47-207ENST00000593089 KATNA1O75449 491 aa20.05■□□□□ 0.8
TRIM47-207ENST00000593089 ZRANB2O95218 330 aaKnown RBP eCLIP20.05■□□□□ 0.8
TRIM47-207ENST00000593089 FGF5P12034 268 aa20.05■□□□□ 0.8
TRIM47-207ENST00000593089 NELFEP18615 380 aaKnown RBP20.05■□□□□ 0.8
TRIM47-207ENST00000593089 HLA-DPA1P20036 260 aa20.05■□□□□ 0.8
TRIM47-207ENST00000593089 FECHP22830 423 aa20.05■□□□□ 0.8
TRIM47-207ENST00000593089 MAGEA1P43355 309 aa20.05■□□□□ 0.8
TRIM47-207ENST00000593089 MARCKSL1P49006 195 aa20.05■□□□□ 0.8
TRIM47-207ENST00000593089 DMPKQ09013 629 aa20.05■□□□□ 0.8
TRIM47-207ENST00000593089 ITGA9Q13797 1035 aa20.05■□□□□ 0.8
TRIM47-207ENST00000593089 SEPT6Q14141 434 aa20.05■□□□□ 0.8
TRIM47-207ENST00000593089 ERV3-1Q14264 604 aa20.05■□□□□ 0.8
TRIM47-207ENST00000593089 NFE2L1Q14494 772 aa20.05■□□□□ 0.8
TRIM47-207ENST00000593089 PTPRCAPQ14761 206 aa20.05■□□□□ 0.8
TRIM47-207ENST00000593089 PLCL1Q15111 1095 aa20.05■□□□□ 0.8
TRIM47-207ENST00000593089 CRTC2Q53ET0 693 aaPredicted RBP20.05■□□□□ 0.8
TRIM47-207ENST00000593089 PPP1R3BQ86XI6 285 aa20.05■□□□□ 0.8
TRIM47-207ENST00000593089 KATNAL2Q8IYT4 538 aa20.05■□□□□ 0.8
TRIM47-207ENST00000593089 QKIQ96PU8 341 aaKnown RBP eCLIP20.05■□□□□ 0.8
TRIM47-207ENST00000593089 FSD1LQ9BXM9 530 aa20.05■□□□□ 0.8
TRIM47-207ENST00000593089 RAB33BQ9H082 229 aa20.05■□□□□ 0.8
TRIM47-207ENST00000593089 TSPY26PQ9H489 355 aa20.05■□□□□ 0.8
TRIM47-207ENST00000593089 ANAPC2Q9UJX6 822 aa20.05■□□□□ 0.8
TRIM47-207ENST00000593089 IGHV5-51A0A0C4DH38 117 aa20.04■□□□□ 0.8
TRIM47-207ENST00000593089 GAPDHSO14556 408 aaPredicted RBP20.04■□□□□ 0.8
TRIM47-207ENST00000593089 AKT1P31749 480 aa20.04■□□□□ 0.8
TRIM47-207ENST00000593089 HADHBP55084 474 aaKnown RBP20.04■□□□□ 0.8
TRIM47-207ENST00000593089 DET1Q7L5Y6 550 aa20.04■□□□□ 0.8
TRIM47-207ENST00000593089 RCOR2Q8IZ40 523 aa20.04■□□□□ 0.8
TRIM47-207ENST00000593089 BEND7Q8N7W2 519 aaPredicted RBP20.04■□□□□ 0.8
TRIM47-207ENST00000593089 SIDT2Q8NBJ9 832 aaKnown RBP20.04■□□□□ 0.8
TRIM47-207ENST00000593089 C10orf88Q9H8K7 445 aa20.04■□□□□ 0.8
TRIM47-207ENST00000593089 IMP3Q9NV31 184 aaKnown RBP20.04■□□□□ 0.8
TRIM47-207ENST00000593089 TFR2Q9UP52 801 aa20.04■□□□□ 0.8
TRIM47-207ENST00000593089 KCTD3Q9Y597 815 aa20.04■□□□□ 0.8
TRIM47-207ENST00000593089 KCNMB2Q9Y691 235 aa20.04■□□□□ 0.8
TRIM47-207ENST00000593089 CFAP20Q9Y6A4 193 aaKnown RBP20.04■□□□□ 0.8
TRIM47-207ENST00000593089 HACD1B0YJ81 288 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 STX7O15400 261 aaKnown RBP20.03■□□□□ 0.8
TRIM47-207ENST00000593089 TIAF1O95411 115 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 AGTP01019 485 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 FURINP09958 794 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 CCNYL3P0C7X3 344 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 MSH3P20585 1137 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 CASRP41180 1078 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 TUBB3Q13509 450 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 KCNAB1Q14722 419 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 SKOR2Q2VWA4 1001 aaPredicted RBP20.03■□□□□ 0.8
TRIM47-207ENST00000593089 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.03■□□□□ 0.8
TRIM47-207ENST00000593089 LACTB2Q53H82 288 aaPredicted RBP20.03■□□□□ 0.8
TRIM47-207ENST00000593089 COLEC12Q5KU26 742 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 FNBP1LQ5T0N5 605 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 CYB5D1Q6P9G0 228 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 KLHL35Q6PF15 583 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 NAT14Q8WUY8 206 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 UBXN4Q92575 508 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 FICDQ9BVA6 458 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 HEMGNQ9BXL5 484 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 PDE7BQ9NP56 450 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 FAM8A1Q9UBU6 413 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 TRHDEQ9UKU6 1024 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 ARL5AQ9Y689 179 aa20.03■□□□□ 0.8
TRIM47-207ENST00000593089 DNMT3AQ9Y6K1 912 aaPredicted RBP20.03■□□□□ 0.8
TRIM47-207ENST00000593089 UBR5O95071 2799 aaPredicted RBP20.02■□□□□ 0.8
TRIM47-207ENST00000593089 CDC14CA4D256 554 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms