RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 RNF214Q8ND24 703 aa17.6■□□□□ 0.41
PRKCSH-211ENST00000590098 STAMBPL1Q96FJ0 436 aa17.6■□□□□ 0.41
PRKCSH-211ENST00000590098 OXNAD1Q96HP4 312 aaPredicted RBP17.6■□□□□ 0.41
PRKCSH-211ENST00000590098 ELMO2Q96JJ3 720 aa17.6■□□□□ 0.41
PRKCSH-211ENST00000590098 QKIQ96PU8 341 aaKnown RBP eCLIP17.6■□□□□ 0.41
PRKCSH-211ENST00000590098 FSD1LQ9BXM9 530 aa17.6■□□□□ 0.41
PRKCSH-211ENST00000590098 UGT1A7Q9HAW7 530 aa17.6■□□□□ 0.41
PRKCSH-211ENST00000590098 UGT1A10Q9HAW8 530 aa17.6■□□□□ 0.41
PRKCSH-211ENST00000590098 UGT1A8Q9HAW9 530 aa17.6■□□□□ 0.41
PRKCSH-211ENST00000590098 EPHA6Q9UF33 1036 aa17.6■□□□□ 0.41
PRKCSH-211ENST00000590098 RSPH14Q9UHP6 348 aa17.6■□□□□ 0.41
PRKCSH-211ENST00000590098 WDR37Q9Y2I8 494 aa17.6■□□□□ 0.41
PRKCSH-211ENST00000590098 PCDHB3Q9Y5E6 796 aa17.6■□□□□ 0.41
PRKCSH-211ENST00000590098 hCG_1818297A0A087WSY0 165 aa17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 KIF1CO43896 1103 aaKnown RBP17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 KIAA0754O94854 1291 aa17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 NDUFA10O95299 355 aa17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 CCNYL3P0C7X3 344 aa17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 ZNF28P17035 718 aa17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 FECHP22830 423 aa17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 OAS2P29728 719 aaKnown RBP17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 DLSTP36957 453 aa17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 DMPKQ09013 629 aa17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 SEPT6Q14141 434 aa17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 CRTC2Q53ET0 693 aaPredicted RBP17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 KLHL35Q6PF15 583 aa17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 TMEM220Q6QAJ8 160 aa17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 RASGEF1AQ8N9B8 481 aa17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 GALNT6Q8NCL4 622 aa17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 C9orf43Q8TAL5 461 aaPredicted RBP17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 KLHL6Q8WZ60 621 aa17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 RNF31Q96EP0 1072 aa17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 RBM41Q96IZ5 413 aaKnown RBP17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 FERMT1Q9BQL6 677 aa17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 RAB33BQ9H082 229 aa17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 GOLPH3Q9H4A6 298 aa17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 DNMT3AQ9Y6K1 912 aaPredicted RBP17.59■□□□□ 0.41
PRKCSH-211ENST00000590098 MAST4O15021 2626 aa17.58■□□□□ 0.41
PRKCSH-211ENST00000590098 STX7O15400 261 aaKnown RBP17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 ARHGAP6O43182 974 aa17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 BUD23O43709 281 aaKnown RBP17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 FGF5P12034 268 aa17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 AKT1P31749 480 aa17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 TLE1Q04724 770 aa17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 TBX2Q13207 712 aaPredicted RBP17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 GPRC6AQ5T6X5 926 aa17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 CCDC181Q5TID7 509 aa17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 PPP1R3BQ86XI6 285 aa17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 DDHD1Q8NEL9 900 aa17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 ZNF514Q96K75 400 aaPredicted RBP17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 HEMGNQ9BXL5 484 aa17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 PDE7BQ9NP56 450 aa17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 ZNF71Q9NQZ8 489 aaPredicted RBP17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 LNPEPQ9UIQ6 1025 aa17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 KCND3Q9UK17 655 aa17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 CROTQ9UKG9 612 aa17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 PSMD13Q9UNM6 376 aa17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 KCTD3Q9Y597 815 aa17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 MRPS18BQ9Y676 258 aaKnown RBP17.58■□□□□ 0.4
PRKCSH-211ENST00000590098 NBASA2RRP1 2371 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 OR2AG2A6NM03 316 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 H7C0C1 242 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 GPR39O43194 453 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 KATNA1O75449 491 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 SPAG6O75602 509 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 ANXA9O76027 345 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 MT-ND3P03897 115 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 NELFEP18615 380 aaKnown RBP17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 MSH3P20585 1137 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 F8A1P23610 371 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 PBLDP30039 288 aaPredicted RBP17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 ATP5OP48047 213 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 CTSCP53634 463 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 GEMP55040 296 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 XRCC4Q13426 336 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 PLCL1Q15111 1095 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 SPA17Q15506 151 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 RPE65Q16518 533 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 LONRF2Q1L5Z9 754 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 ATP1A1-AS1Q5TC04 95 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 SIDT2Q8NBJ9 832 aaKnown RBP17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 ZNF398Q8TD17 642 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 UBXN4Q92575 508 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 COL26A1Q96A83 441 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 LUC7LQ9NQ29 371 aaKnown RBP17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 PADI1Q9ULC6 663 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 COL12A1Q99715 3063 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 PTPN13Q12923 2485 aa17.57■□□□□ 0.4
PRKCSH-211ENST00000590098 C2orf81A6NN90 581 aa17.56■□□□□ 0.4
PRKCSH-211ENST00000590098 AGTP01019 485 aa17.56■□□□□ 0.4
PRKCSH-211ENST00000590098 MARCKSL1P49006 195 aa17.56■□□□□ 0.4
PRKCSH-211ENST00000590098 ARL4DP49703 201 aa17.56■□□□□ 0.4
PRKCSH-211ENST00000590098 NFE2L1Q14494 772 aa17.56■□□□□ 0.4
PRKCSH-211ENST00000590098 SKIDA1Q1XH10 827 aa17.56■□□□□ 0.4
PRKCSH-211ENST00000590098 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.56■□□□□ 0.4
PRKCSH-211ENST00000590098 FNBP1LQ5T0N5 605 aa17.56■□□□□ 0.4
PRKCSH-211ENST00000590098 METRNLQ641Q3 311 aa17.56■□□□□ 0.4
PRKCSH-211ENST00000590098 ITPRIPL1Q6GPH6 555 aa17.56■□□□□ 0.4
PRKCSH-211ENST00000590098 C11orf63Q6NUN7 778 aa17.56■□□□□ 0.4
PRKCSH-211ENST00000590098 FAM83HQ6ZRV2 1179 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms