RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 PRICKLE2Q7Z3G6 844 aa12.43□□□□□ -0.42
RFX1-207ENST00000589937 TMEM139Q8IV31 216 aa12.43□□□□□ -0.42
RFX1-207ENST00000589937 OR4K2Q8NGD2 314 aa12.43□□□□□ -0.42
RFX1-207ENST00000589937 OR13C4Q8NGS5 318 aa12.43□□□□□ -0.42
RFX1-207ENST00000589937 SH3KBP1Q96B97 665 aa12.43□□□□□ -0.42
RFX1-207ENST00000589937 CXorf40BQ96DE9 158 aa12.43□□□□□ -0.42
RFX1-207ENST00000589937 NRTNQ99748 197 aa12.43□□□□□ -0.42
RFX1-207ENST00000589937 DESI2Q9BSY9 194 aa12.43□□□□□ -0.42
RFX1-207ENST00000589937 ANP32EQ9BTT0 268 aa12.43□□□□□ -0.42
RFX1-207ENST00000589937 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.43□□□□□ -0.42
RFX1-207ENST00000589937 TRABDQ9H4I3 376 aa12.43□□□□□ -0.42
RFX1-207ENST00000589937 FAM96AQ9H5X1 160 aa12.43□□□□□ -0.42
RFX1-207ENST00000589937 SLC40A1Q9NP59 571 aa12.43□□□□□ -0.42
RFX1-207ENST00000589937 PCDHA3Q9Y5H8 950 aa12.43□□□□□ -0.42
RFX1-207ENST00000589937 EPN1Q9Y6I3 576 aaPredicted RBP12.43□□□□□ -0.42
RFX1-207ENST00000589937 TCRBV7S2A1N4TA0A589 114 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 OR5K4A6NMS3 321 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 B8ZZF3 427 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 SGTAO43765 313 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 SLC28A2O43868 658 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 POP7O75817 140 aaKnown RBP12.42□□□□□ -0.42
RFX1-207ENST00000589937 RASSF9O75901 435 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 TIAF1O95411 115 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 DLGAP3O95886 979 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 FTCDO95954 541 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 ANKRD34CP0C6C1 535 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 PRSS56P0CW18 603 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 RBP3P10745 1247 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 CTNNA2P26232 953 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 ARCN1P48444 511 aaKnown RBP12.42□□□□□ -0.42
RFX1-207ENST00000589937 TMPRSS15P98073 1019 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 FOXM1Q08050 763 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 KCNAB1Q14722 419 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 RPE65Q16518 533 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 ANKRD20A2Q5SQ80 823 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 ANKRD20A1Q5TYW2 823 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 AGAP9Q5VTM2 703 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 ANKRD20A3Q5VUR7 823 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 IRGCQ6NXR0 463 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 TMEM220Q6QAJ8 160 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 ABRAXAS1Q6UWZ7 409 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 CDKL3Q8IVW4 592 aaPredicted RBP12.42□□□□□ -0.42
RFX1-207ENST00000589937 TAB3Q8N5C8 712 aaPredicted RBP12.42□□□□□ -0.42
RFX1-207ENST00000589937 SPDYE1Q8NFV5 336 aaPredicted RBP12.42□□□□□ -0.42
RFX1-207ENST00000589937 MRFAP1L1Q96HT8 127 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 VAT1Q99536 393 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 ARHGAP9Q9BRR9 750 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 ASPSCR1Q9BZE9 553 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 UCK1Q9HA47 277 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 POT1Q9NUX5 634 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 PIH1D1Q9NWS0 290 aaKnown RBP12.42□□□□□ -0.42
RFX1-207ENST00000589937 HACD3Q9P035 362 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 TRHDEQ9UKU6 1024 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 R3HDM2Q9Y2K5 976 aaKnown RBP12.42□□□□□ -0.42
RFX1-207ENST00000589937 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.42□□□□□ -0.42
RFX1-207ENST00000589937 PKP3Q9Y446 797 aa12.42□□□□□ -0.42
RFX1-207ENST00000589937 J3QKU1 62 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 STX7O15400 261 aaKnown RBP12.41□□□□□ -0.42
RFX1-207ENST00000589937 NKX2-8O15522 239 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 EPOP01588 193 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 ITGB2P05107 769 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 AMD1P17707 334 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 IDSP22304 550 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 F8A1P23610 371 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 OAS2P29728 719 aaKnown RBP12.41□□□□□ -0.42
RFX1-207ENST00000589937 PTPN7P35236 360 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 TNNT3P45378 269 aaPredicted RBP12.41□□□□□ -0.42
RFX1-207ENST00000589937 CDKN1CP49918 316 aaPredicted RBP12.41□□□□□ -0.42
RFX1-207ENST00000589937 ZNF140P52738 457 aaPredicted RBP12.41□□□□□ -0.42
RFX1-207ENST00000589937 GEMP55040 296 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 NAP1L1P55209 391 aaKnown RBP12.41□□□□□ -0.42
RFX1-207ENST00000589937 XIAPP98170 497 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 MSLNQ13421 630 aaPredicted RBP12.41□□□□□ -0.42
RFX1-207ENST00000589937 XRCC4Q13426 336 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 LDLRAP1Q5SW96 308 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 DENND5AQ6IQ26 1287 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 DARS2Q6PI48 645 aaKnown RBP12.41□□□□□ -0.42
RFX1-207ENST00000589937 CEACAM20Q6UY09 585 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 WASH2PQ6VEQ5 465 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 AMZ2Q86W34 360 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 PLXDC1Q8IUK5 500 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 NLGN4XQ8N0W4 816 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 ZSCAN1Q8NBB4 408 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 NLGN4YQ8NFZ3 816 aaPredicted RBP12.41□□□□□ -0.42
RFX1-207ENST00000589937 RMDN2Q96LZ7 410 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 PPM1MQ96MI6 270 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 OR6C1Q96RD1 312 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 ULBP3Q9BZM4 244 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 WWP1Q9H0M0 922 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 EPB41L1Q9H4G0 881 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 ZNF768Q9H5H4 540 aaKnown RBP12.41□□□□□ -0.42
RFX1-207ENST00000589937 GPN2Q9H9Y4 310 aaPredicted RBP12.41□□□□□ -0.42
RFX1-207ENST00000589937 WASH6PQ9NQA3 447 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 FBXO8Q9NRD0 319 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 IMP3Q9NV31 184 aaKnown RBP12.41□□□□□ -0.42
RFX1-207ENST00000589937 SMOXQ9NWM0 555 aa12.41□□□□□ -0.42
RFX1-207ENST00000589937 TMEM184BQ9Y519 407 aaPredicted RBP12.41□□□□□ -0.42
RFX1-207ENST00000589937 UBR5O95071 2799 aaPredicted RBP12.41□□□□□ -0.42
RFX1-207ENST00000589937 IGHV5-51A0A0C4DH38 117 aa12.4□□□□□ -0.42
RFX1-207ENST00000589937 CCDC78A2IDD5 438 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms