RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 DEFB107AQ8IZN7 70 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 DSELQ8IZU8 1212 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 POU5F2Q8N7G0 328 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 PCYOX1LQ8NBM8 494 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 VN1R2Q8NFZ6 395 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 GIMAP7Q8NHV1 300 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 RIN3Q8TB24 985 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 UBTD2Q8WUN7 234 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 TWIST2Q8WVJ9 160 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 MOCOSQ96EN8 888 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 SLC30A3Q99726 388 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 CD248Q9HCU0 757 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 ELOVL2Q9NXB9 296 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 DEC1Q9P2X7 70 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 GALPQ9UBC7 116 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 CDH22Q9UJ99 828 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 PTBP2Q9UKA9 531 aaKnown RBP10.25□□□□□ -0.77
VPS25-203ENST00000589520 NDUFAF1Q9Y375 327 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 DNAJC15Q9Y5T4 150 aa10.25□□□□□ -0.77
VPS25-203ENST00000589520 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.25□□□□□ -0.77
VPS25-203ENST00000589520 EDDM13A0A1B0GTR0 161 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 TMEM233B4DJY2 109 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 E2F3O00716 465 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 AIM2O14862 343 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 PER2O15055 1255 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 BNIP3LO60238 219 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 NUAK1O60285 661 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 ENTPD5O75356 428 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 KATNA1O75449 491 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 SKAP2O75563 359 aaPredicted RBP10.24□□□□□ -0.77
VPS25-203ENST00000589520 LEFTY1O75610 366 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 WDR47O94967 919 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 SIX3O95343 332 aaPredicted RBP10.24□□□□□ -0.77
VPS25-203ENST00000589520 TRIM16O95361 564 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 ANXA5P08758 320 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 GSTM1P09488 218 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 HIST1H2AGP0C0S8 130 aaPredicted RBP10.24□□□□□ -0.77
VPS25-203ENST00000589520 ATP1B2P14415 290 aaPredicted RBP10.24□□□□□ -0.77
VPS25-203ENST00000589520 IDO1P14902 403 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 TIMP2P16035 220 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 HIST1H2ADP20671 130 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 LHCGRP22888 699 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 PSMD8P48556 350 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 HNMTP50135 292 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 NUDT2P50583 147 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 GSTM4Q03013 218 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 ELP6Q0PNE2 266 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 PTK2BQ14289 1009 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 FASTKQ14296 549 aaKnown RBP10.24□□□□□ -0.77
VPS25-203ENST00000589520 PTPRRQ15256 657 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 RPS6KA2Q15349 733 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 RAB30Q15771 203 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 RBBP7Q16576 425 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 MMEL1Q495T6 779 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 ATP13A5Q4VNC0 1218 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 CMPK2Q5EBM0 449 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 ARSIQ5FYB1 569 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 ZNF697Q5TEC3 545 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 ICE2Q659A1 982 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 TMEM215Q68D42 235 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 SBSNQ6UWP8 590 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 CYHR1Q6ZMK1 362 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 BNC2Q6ZN30 1099 aaPredicted RBP10.24□□□□□ -0.77
VPS25-203ENST00000589520 RIPOR1Q6ZS17 1223 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 GPRIN3Q6ZVF9 776 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 TSPAN33Q86UF1 283 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 MYLK4Q86YV6 388 aaPredicted RBP10.24□□□□□ -0.77
VPS25-203ENST00000589520 ETFBKMTQ8IXQ9 262 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 NAT16Q8N8M0 369 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 CHST14Q8NCH0 376 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 PPFIBP2Q8ND30 876 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 ITFG1Q8TB96 612 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 FAM136AQ96C01 138 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 ROPN1LQ96C74 230 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 PPP1R16AQ96I34 528 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 HIST1H2AHQ96KK5 128 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 ASB16Q96NS5 453 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 VPS35Q96QK1 796 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 HIST1H2AJQ99878 128 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 FAM83CQ9BQN1 747 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 H2AFJQ9BTM1 129 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 EPHX3Q9H6B9 360 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 AKTIPQ9H8T0 292 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 SEMA4BQ9NPR2 832 aaPredicted RBP10.24□□□□□ -0.77
VPS25-203ENST00000589520 ACSS2Q9NR19 701 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 SUN2Q9UH99 717 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 MSRAQ9UJ68 235 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 SARDHQ9UL12 918 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 FIS1Q9Y3D6 152 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 PRSS21Q9Y6M0 314 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 ANKRD36A6QL64 1941 aa10.24□□□□□ -0.77
VPS25-203ENST00000589520 HELZP42694 1942 aaKnown RBP10.23□□□□□ -0.77
VPS25-203ENST00000589520 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.23□□□□□ -0.77
VPS25-203ENST00000589520 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.23□□□□□ -0.77
VPS25-203ENST00000589520 C16orf96A6NNT2 1141 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 IQCF5A8MTL0 148 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 TTC34A8MYJ7 566 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 IFRD1O00458 451 aaPredicted RBP10.23□□□□□ -0.77
VPS25-203ENST00000589520 NRP2O60462 931 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 TULP3O75386 442 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms