RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 APOA4P06727 396 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 CHRM3P20309 590 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 ATP5DP30049 168 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 NBL1P41271 181 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 CTSKP43235 329 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 GNPDA1P46926 289 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 SERPINB8P50452 374 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 CTSCP53634 463 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 DMPKQ09013 629 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 INSCQ1MX18 579 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 ZNF648Q5T619 568 aaPredicted RBP16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 OTOAQ7RTW8 1153 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 HID1Q8IV36 788 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 PHACTR4Q8IZ21 702 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 FSTL5Q8N475 847 aaPredicted RBP16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 OR2L2Q8NH16 312 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 HM13Q8TCT9 377 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 ASZ1Q8WWH4 475 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 OR1E3Q8WZA6 343 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 MRRFQ96E11 262 aaKnown RBP16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 PDXPQ96GD0 296 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 ATXN7L3BQ96GX2 97 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 ZIM3Q96PE6 472 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 NUSAP1Q9BXS6 441 aaKnown RBP16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 STMN4Q9H169 189 aaPredicted RBP16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 CAPN10Q9HC96 672 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 LATS2Q9NRM7 1088 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 LGALS13Q9UHV8 139 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 TRMT6Q9UJA5 497 aaKnown RBP16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 PRSS21Q9Y6M0 314 aa16.7■□□□□ 0.26
SCAMP4-211ENST00000588907 LRP4O75096 1905 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 A0A1B0GVT2 93 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 LRP3O75074 770 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 POP7O75817 140 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 CER1O95813 267 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 STMN1P16949 149 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 JUNDP17535 347 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 FDXRP22570 491 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 GCAP28676 217 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 CRABP2P29373 138 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 MAPK9P45984 424 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 CLCNKAP51800 687 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 ZNF844Q08AG5 666 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 ILF3Q12906 894 aaKnown RBP eCLIP16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 EIF2B5Q13144 721 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 RPA4Q13156 261 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 PDAP1Q13442 181 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 USP10Q14694 798 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 KRT71Q3SY84 523 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 SYTL3Q4VX76 610 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 TRIM61Q5EBN2 209 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 TPRG1LQ5T0D9 272 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 ZNF549Q6P9A3 640 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 CRTC3Q6UUV7 619 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 KDM7AQ6ZMT4 941 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 TIFABQ6ZNK6 161 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 MICALCLQ6ZW33 695 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 SPATS2Q86XZ4 545 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 ZNF547Q8IVP9 402 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 BEND7Q8N7W2 519 aaPredicted RBP16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 EPS8L3Q8TE67 593 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 ISL2Q96A47 359 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 CABS1Q96KC9 395 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 NDNQ99608 321 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 GSDMCQ9BYG8 508 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 DNAJC28Q9NX36 388 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 SPASTQ9UBP0 616 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 APOBEC3BQ9UH17 382 aaKnown RBP16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 GPSM3Q9Y4H4 160 aa16.69■□□□□ 0.26
SCAMP4-211ENST00000588907 KHNYNO15037 678 aaKnown RBP16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 ATP8B1O43520 1251 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 FOXD2O60548 495 aaPredicted RBP16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 FAM155BO75949 473 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 TRIM16O95361 564 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 MYZAPP0CAP1 466 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 CBSLP0DN79 551 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 ENO3P13929 434 aaPredicted RBP16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 CTSEP14091 401 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 CBSP35520 551 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 SLC26A3P40879 764 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 PI4KAP42356 2102 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 RXRGP48443 463 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 RAB10P61026 200 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 ARHGAP8P85298 464 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 ELOCQ15369 112 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 ZKSCAN8Q15776 578 aaPredicted RBP16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 LPAL2Q16609 132 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 KIF19Q2TAC6 998 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 TAF1BQ53T94 588 aaPredicted RBP16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 PLEKHS1Q5SXH7 462 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 CEP85LQ5SZL2 805 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 RBM20Q5T481 1227 aaKnown RBP16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 MROH9Q5TGP6 573 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 LAYNQ6UX15 382 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 C11orf96Q7Z7L8 435 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 DCLK2Q8N568 766 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 PNPLA1Q8N8W4 532 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 SUMF1Q8NBK3 374 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 OR2W6PQ8NHA6 318 aa16.68■□□□□ 0.26
SCAMP4-211ENST00000588907 ACMSDQ8TDX5 336 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms