RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 SIGLEC6O43699 453 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 MTX2O75431 263 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 ZNF8P17098 575 aaPredicted RBP19.87■□□□□ 0.77
ATG4D-208ENST00000588667 MSH2P43246 934 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 ARSDP51689 593 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 LRP8Q14114 963 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 TRIP6Q15654 476 aaKnown RBP19.87■□□□□ 0.77
ATG4D-208ENST00000588667 GPR33Q49SQ1 333 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 ZCCHC8Q6NZY4 707 aaKnown RBP19.87■□□□□ 0.77
ATG4D-208ENST00000588667 GLRX5Q86SX6 157 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 FAM76AQ8TAV0 307 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 GPBAR1Q8TDU6 330 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 SCG3Q8WXD2 468 aaKnown RBP19.87■□□□□ 0.77
ATG4D-208ENST00000588667 TLCD1Q96CP7 247 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 CNDP2Q96KP4 475 aaKnown RBP19.87■□□□□ 0.77
ATG4D-208ENST00000588667 ZNF778Q96MU6 729 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 TRIM56Q9BRZ2 755 aaKnown RBP19.87■□□□□ 0.77
ATG4D-208ENST00000588667 KIFC1Q9BW19 673 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 GSDMCQ9BYG8 508 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 CHRAC1Q9NRG0 131 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 MOCS1Q9NZB8 636 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 SLC2A6Q9UGQ3 507 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 GPSM3Q9Y4H4 160 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 GIPC1O14908 333 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 CHUKO15111 745 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 YY2O15391 372 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 CDK14O94921 469 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 LDOC1O95751 146 aaPredicted RBP19.87■□□□□ 0.77
ATG4D-208ENST00000588667 CA5AP35218 305 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 CACNG1Q06432 222 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 TMEM115Q12893 351 aaPredicted RBP19.87■□□□□ 0.77
ATG4D-208ENST00000588667 FRG1Q14331 258 aaKnown RBP19.87■□□□□ 0.77
ATG4D-208ENST00000588667 PROX2Q3B8N5 592 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 ZRANB3Q5FWF4 1079 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 ZNF449Q6P9G9 518 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 TAF8Q7Z7C8 310 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 LRRC6Q86X45 466 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 NXPE1Q8N323 547 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 FAM181AQ8N9Y4 354 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 CDKL2Q92772 493 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 ZNF669Q96BR6 464 aaPredicted RBP19.87■□□□□ 0.77
ATG4D-208ENST00000588667 PAFAH2Q99487 392 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 DHRS4Q9BTZ2 278 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 EURLQ9NYK6 297 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 ZNHIT2Q9UHR6 403 aa19.87■□□□□ 0.77
ATG4D-208ENST00000588667 PCYT1BQ9Y5K3 369 aaPredicted RBP19.87■□□□□ 0.77
ATG4D-208ENST00000588667 TRBV5-4A0A0C4DH59 114 aa19.86■□□□□ 0.77
ATG4D-208ENST00000588667 GRID2O43424 1007 aa19.86■□□□□ 0.77
ATG4D-208ENST00000588667 TNFSF14O43557 240 aa19.86■□□□□ 0.77
ATG4D-208ENST00000588667 GCAP28676 217 aa19.86■□□□□ 0.77
ATG4D-208ENST00000588667 MAGOHP61326 146 aaKnown RBP19.86■□□□□ 0.77
ATG4D-208ENST00000588667 CTBSQ01459 385 aa19.86■□□□□ 0.77
ATG4D-208ENST00000588667 GTF2H3Q13889 308 aa19.86■□□□□ 0.77
ATG4D-208ENST00000588667 EFTUD2Q15029 972 aaKnown RBP eCLIP19.86■□□□□ 0.773e-7■■□□□ 12.2
ATG4D-208ENST00000588667 ANKRD20A4Q4UJ75 823 aa19.86■□□□□ 0.77
ATG4D-208ENST00000588667 TNFAIP8L3Q5GJ75 292 aa19.86■□□□□ 0.77
ATG4D-208ENST00000588667 PPM1JQ5JR12 505 aa19.86■□□□□ 0.77
ATG4D-208ENST00000588667 C6orf132Q5T0Z8 1188 aa19.86■□□□□ 0.77
ATG4D-208ENST00000588667 AFTPHQ6ULP2 937 aa19.86■□□□□ 0.77
ATG4D-208ENST00000588667 DGLUCYQ7Z3D6 616 aa19.86■□□□□ 0.77
ATG4D-208ENST00000588667 CTAGE3PQ8IX95 158 aa19.86■□□□□ 0.77
ATG4D-208ENST00000588667 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.86■□□□□ 0.77
ATG4D-208ENST00000588667 CCL4L1Q8NHW4 92 aa19.86■□□□□ 0.77
ATG4D-208ENST00000588667 HDAC10Q969S8 669 aa19.86■□□□□ 0.77
ATG4D-208ENST00000588667 TREX1Q9NSU2 369 aa19.86■□□□□ 0.77
ATG4D-208ENST00000588667 CTNNAL1Q9UBT7 734 aa19.86■□□□□ 0.77
ATG4D-208ENST00000588667 FAM169AQ9Y6X4 670 aa19.86■□□□□ 0.77
ATG4D-208ENST00000588667 CCDC162PA2VCL2 907 aa19.85■□□□□ 0.77
ATG4D-208ENST00000588667 FAM159BA6NKW6 160 aa19.85■□□□□ 0.77
ATG4D-208ENST00000588667 INHBAP08476 426 aa19.85■□□□□ 0.77
ATG4D-208ENST00000588667 AKT1P31749 480 aa19.85■□□□□ 0.77
ATG4D-208ENST00000588667 PRAMEP78395 509 aa19.85■□□□□ 0.77
ATG4D-208ENST00000588667 TRMT10BQ6PF06 316 aaKnown RBP19.85■□□□□ 0.77
ATG4D-208ENST00000588667 ADGRD1Q6QNK2 874 aa19.85■□□□□ 0.77
ATG4D-208ENST00000588667 TAOK1Q7L7X3 1001 aa19.85■□□□□ 0.77
ATG4D-208ENST00000588667 LRRTM4Q86VH4 590 aa19.85■□□□□ 0.77
ATG4D-208ENST00000588667 NRROSQ86YC3 692 aa19.85■□□□□ 0.77
ATG4D-208ENST00000588667 SLC44A1Q8WWI5 657 aa19.85■□□□□ 0.77
ATG4D-208ENST00000588667 MRRFQ96E11 262 aaKnown RBP19.85■□□□□ 0.77
ATG4D-208ENST00000588667 SGSM3Q96HU1 749 aa19.85■□□□□ 0.77
ATG4D-208ENST00000588667 BOCQ9BWV1 1114 aa19.85■□□□□ 0.77
ATG4D-208ENST00000588667 PPANQ9NQ55 473 aaKnown RBP19.85■□□□□ 0.77
ATG4D-208ENST00000588667 NCKIPSDQ9NZQ3 722 aa19.85■□□□□ 0.77
ATG4D-208ENST00000588667 TBK1Q9UHD2 729 aa19.85■□□□□ 0.77
ATG4D-208ENST00000588667 PRKAB1Q9Y478 270 aa19.85■□□□□ 0.77
ATG4D-208ENST00000588667 ASXL3Q9C0F0 2248 aa19.85■□□□□ 0.77
ATG4D-208ENST00000588667 C1QAP02745 245 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 NR1D1P20393 614 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 MSH3P20585 1137 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 KCNA4P22459 653 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 FOXN2P32314 431 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 SIM1P81133 766 aaPredicted RBP19.84■□□□□ 0.77
ATG4D-208ENST00000588667 NAB1Q13506 487 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 TMED2Q15363 201 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 CHST15Q7LFX5 561 aaPredicted RBP19.84■□□□□ 0.77
ATG4D-208ENST00000588667 SLC26A11Q86WA9 606 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 ARFGAP2Q8N6H7 521 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 PPM1NQ8N819 430 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 GLMNQ92990 594 aa19.84■□□□□ 0.77
ATG4D-208ENST00000588667 CERS2Q96G23 380 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms