RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 PPP2R5EQ16537 467 aa13.87□□□□□ -0.19
ERCC1-205ENST00000587888 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.87□□□□□ -0.19
ERCC1-205ENST00000587888 SIRPB2Q5JXA9 342 aa13.87□□□□□ -0.19
ERCC1-205ENST00000587888 PWWP2BQ6NUJ5 590 aa13.87□□□□□ -0.19
ERCC1-205ENST00000587888 TCTN3Q6NUS6 607 aa13.87□□□□□ -0.19
ERCC1-205ENST00000587888 FAM199XQ6PEV8 388 aaPredicted RBP13.87□□□□□ -0.19
ERCC1-205ENST00000587888 MFSD7Q6UXD7 560 aa13.87□□□□□ -0.19
ERCC1-205ENST00000587888 FAM83HQ6ZRV2 1179 aaPredicted RBP13.87□□□□□ -0.19
ERCC1-205ENST00000587888 ZC3H18Q86VM9 953 aaKnown RBP13.87□□□□□ -0.19
ERCC1-205ENST00000587888 VSIG1Q86XK7 387 aa13.87□□□□□ -0.19
ERCC1-205ENST00000587888 RHOT1Q8IXI2 618 aa13.87□□□□□ -0.19
ERCC1-205ENST00000587888 BLOC1S5Q8TDH9 187 aa13.87□□□□□ -0.19
ERCC1-205ENST00000587888 TFB1MQ8WVM0 346 aaKnown RBP13.87□□□□□ -0.19
ERCC1-205ENST00000587888 AKIRIN1Q9H9L7 192 aaPredicted RBP13.87□□□□□ -0.19
ERCC1-205ENST00000587888 LHX9Q9NQ69 397 aa13.87□□□□□ -0.19
ERCC1-205ENST00000587888 DDX56Q9NY93 547 aaKnown RBP13.87□□□□□ -0.19
ERCC1-205ENST00000587888 RARRES3Q9UL19 164 aa13.87□□□□□ -0.19
ERCC1-205ENST00000587888 SSU72P8A0A1W2PR75 194 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 CST8O60676 142 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 KCNJ13O60928 360 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 TPM3P06753 285 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 EBLN1P0CF75 366 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 NFKB1P19838 968 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 COMTP21964 271 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 SPAM1P38567 509 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 NR2C2P49116 596 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 CTSCP53634 463 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 WASHC5Q12768 1159 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 NFE2L1Q14494 772 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 PLCL1Q15111 1095 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 PRKD1Q15139 912 aaPredicted RBP13.86□□□□□ -0.19
ERCC1-205ENST00000587888 LDLRAP1Q5SW96 308 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 LRRC38Q5VT99 294 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 CYB5D1Q6P9G0 228 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 KDELC1Q6UW63 502 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 CERS6Q6ZMG9 384 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 BZW1Q7L1Q6 419 aaKnown RBP13.86□□□□□ -0.19
ERCC1-205ENST00000587888 PID1Q7Z2X4 250 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 RHOT2Q8IXI1 618 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 GPR150Q8NGU9 434 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 UBXN4Q92575 508 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 SLC41A2Q96JW4 573 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 CCDC42Q96M95 316 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 RUFY1Q96T51 708 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 DNAJC7Q99615 494 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 MAP3K3Q99759 626 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 RAB33BQ9H082 229 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 NHEJ1Q9H9Q4 299 aaPredicted RBP13.86□□□□□ -0.19
ERCC1-205ENST00000587888 IL17CQ9P0M4 197 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 KLHL8Q9P2G9 620 aaPredicted RBP13.86□□□□□ -0.19
ERCC1-205ENST00000587888 MAN2B2Q9Y2E5 1009 aa13.86□□□□□ -0.19
ERCC1-205ENST00000587888 CFAP20Q9Y6A4 193 aaKnown RBP13.86□□□□□ -0.19
ERCC1-205ENST00000587888 GLYATL1P3A0A0U1RQE8 302 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 UBA6A0AVT1 1052 aaPredicted RBP13.85□□□□□ -0.19
ERCC1-205ENST00000587888 GOLGA6L3A6NEY3 463 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 SPOPO43791 374 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 RFPL1O75677 317 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 DNAJB5O75953 348 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 PECAM1P16284 738 aaPredicted RBP13.85□□□□□ -0.19
ERCC1-205ENST00000587888 CDKN2BP42772 138 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 SLC1A1P43005 524 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 XRCC4Q13426 336 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 PTPRCAPQ14761 206 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 FNBP1LQ5T0N5 605 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 KLHL35Q6PF15 583 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 DET1Q7L5Y6 550 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 GLT6D1Q7Z4J2 308 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 BEND7Q8N7W2 519 aaPredicted RBP13.85□□□□□ -0.19
ERCC1-205ENST00000587888 IPMKQ8NFU5 416 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 NAT14Q8WUY8 206 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 MIB2Q96AX9 1013 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 MRGPRX2Q96LB1 330 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 ZCCHC2Q9C0B9 1178 aaKnown RBP13.85□□□□□ -0.19
ERCC1-205ENST00000587888 TRABDQ9H4I3 376 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 ACTL8Q9H568 366 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 IMP3Q9NV31 184 aaKnown RBP13.85□□□□□ -0.19
ERCC1-205ENST00000587888 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.85□□□□□ -0.19
ERCC1-205ENST00000587888 FAM8A1Q9UBU6 413 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 PKP3Q9Y446 797 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 PCDHGA6Q9Y5G7 932 aa13.85□□□□□ -0.19
ERCC1-205ENST00000587888 HECTD1Q9ULT8 2610 aa13.84□□□□□ -0.19
ERCC1-205ENST00000587888 EPOP01588 193 aa13.84□□□□□ -0.19
ERCC1-205ENST00000587888 TPM1P09493 284 aa13.84□□□□□ -0.19
ERCC1-205ENST00000587888 MSH3P20585 1137 aa13.84□□□□□ -0.19
ERCC1-205ENST00000587888 AKT1P31749 480 aa13.84□□□□□ -0.19
ERCC1-205ENST00000587888 PMS2P54278 862 aa13.84□□□□□ -0.19
ERCC1-205ENST00000587888 RPS18P62269 152 aaKnown RBP13.84□□□□□ -0.19
ERCC1-205ENST00000587888 ACY1Q03154 408 aa13.84□□□□□ -0.19
ERCC1-205ENST00000587888 ADCY2Q08462 1091 aa13.84□□□□□ -0.19
ERCC1-205ENST00000587888 DMPKQ09013 629 aa13.84□□□□□ -0.19
ERCC1-205ENST00000587888 TFDP2Q14188 446 aa13.84□□□□□ -0.19
ERCC1-205ENST00000587888 SLC1A5Q15758 541 aa13.84□□□□□ -0.19
ERCC1-205ENST00000587888 DNTTIP2Q5QJE6 756 aaKnown RBP13.84□□□□□ -0.19
ERCC1-205ENST00000587888 GPRC6AQ5T6X5 926 aa13.84□□□□□ -0.19
ERCC1-205ENST00000587888 ZDHHC20Q5W0Z9 365 aa13.84□□□□□ -0.19
ERCC1-205ENST00000587888 METRNLQ641Q3 311 aa13.84□□□□□ -0.19
ERCC1-205ENST00000587888 ATCAYQ86WG3 371 aa13.84□□□□□ -0.19
ERCC1-205ENST00000587888 ZNF567Q8N184 647 aa13.84□□□□□ -0.19
ERCC1-205ENST00000587888 FAM26EQ8N5C1 309 aa13.84□□□□□ -0.19
ERCC1-205ENST00000587888 P3H4Q92791 437 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms