RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 GPS1Q13098 491 aa18.43■□□□□ 0.54
ATG4D-203ENST00000585752 SQSTM1Q13501 440 aa18.43■□□□□ 0.54
ATG4D-203ENST00000585752 OLIG2Q13516 323 aa18.43■□□□□ 0.54
ATG4D-203ENST00000585752 SEMA5AQ13591 1074 aa18.43■□□□□ 0.54
ATG4D-203ENST00000585752 ITGA9Q13797 1035 aa18.43■□□□□ 0.54
ATG4D-203ENST00000585752 SEPT6Q14141 434 aa18.43■□□□□ 0.54
ATG4D-203ENST00000585752 KCTD11Q693B1 232 aa18.43■□□□□ 0.54
ATG4D-203ENST00000585752 TTC27Q6P3X3 843 aa18.43■□□□□ 0.54
ATG4D-203ENST00000585752 ZNF574Q6ZN55 896 aaPredicted RBP18.43■□□□□ 0.54
ATG4D-203ENST00000585752 ZFAND4Q86XD8 727 aa18.43■□□□□ 0.54
ATG4D-203ENST00000585752 CREG2Q8IUH2 290 aa18.43■□□□□ 0.54
ATG4D-203ENST00000585752 ZNF592Q92610 1267 aa18.43■□□□□ 0.54
ATG4D-203ENST00000585752 EPB41L1Q9H4G0 881 aa18.43■□□□□ 0.54
ATG4D-203ENST00000585752 PRDM8Q9NQV8 689 aa18.43■□□□□ 0.54
ATG4D-203ENST00000585752 CPNE7Q9UBL6 633 aa18.43■□□□□ 0.54
ATG4D-203ENST00000585752 EFCAB7A8K855 629 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 STMND1H3BQB6 276 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 CCDC188H7C350 402 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 PPFIA2O75334 1257 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 MTX2O75431 263 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 TUBB4AP04350 444 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 THRAP10827 490 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 CCL4P13236 92 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 ZNF7P17097 686 aaPredicted RBP18.42■□□□□ 0.54
ATG4D-203ENST00000585752 AMD1P17707 334 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 LPOP22079 712 aaPredicted RBP18.42■□□□□ 0.54
ATG4D-203ENST00000585752 IDSP22304 550 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 CLCNKAP51800 687 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 TERF1P54274 439 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 EPHA4P54764 986 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 SARNPP82979 210 aaKnown RBP18.42■□□□□ 0.54
ATG4D-203ENST00000585752 CDH17Q12864 832 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 TMEM115Q12893 351 aaPredicted RBP18.42■□□□□ 0.54
ATG4D-203ENST00000585752 TAF1AQ15573 450 aaPredicted RBP18.42■□□□□ 0.54
ATG4D-203ENST00000585752 TGIF1Q15583 401 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 SEPT7Q16181 437 aaKnown RBP18.42■□□□□ 0.54
ATG4D-203ENST00000585752 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.42■□□□□ 0.54
ATG4D-203ENST00000585752 DCAF12Q5T6F0 453 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 TRAPPC5Q8IUR0 188 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 KLHL7Q8IXQ5 586 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 GLIS1Q8NBF1 620 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 WBP1Q96G27 269 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 VPS35Q96QK1 796 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 ARHGAP9Q9BRR9 750 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 ASPSCR1Q9BZE9 553 aa18.42■□□□□ 0.54
ATG4D-203ENST00000585752 PCYT1BQ9Y5K3 369 aaPredicted RBP18.42■□□□□ 0.54
ATG4D-203ENST00000585752 AP3B1O00203 1094 aa18.41■□□□□ 0.54
ATG4D-203ENST00000585752 AURKAO14965 403 aa18.41■□□□□ 0.54
ATG4D-203ENST00000585752 EML2O95834 649 aa18.41■□□□□ 0.54
ATG4D-203ENST00000585752 PRB1P04280 392 aa18.41■□□□□ 0.54
ATG4D-203ENST00000585752 HALP42357 657 aa18.41■□□□□ 0.54
ATG4D-203ENST00000585752 RAB15P59190 212 aa18.41■□□□□ 0.54
ATG4D-203ENST00000585752 CFHR1Q03591 330 aa18.41■□□□□ 0.54
ATG4D-203ENST00000585752 LAMB3Q13751 1172 aa18.41■□□□□ 0.54
ATG4D-203ENST00000585752 LDLRAP1Q5SW96 308 aa18.41■□□□□ 0.54
ATG4D-203ENST00000585752 WDR74Q6RFH5 385 aaPredicted RBP18.41■□□□□ 0.54
ATG4D-203ENST00000585752 KLHDC8BQ8IXV7 354 aa18.41■□□□□ 0.54
ATG4D-203ENST00000585752 IL22RA1Q8N6P7 574 aa18.41■□□□□ 0.54
ATG4D-203ENST00000585752 CXorf40BQ96DE9 158 aa18.41■□□□□ 0.54
ATG4D-203ENST00000585752 SGF29Q96ES7 293 aa18.41■□□□□ 0.54
ATG4D-203ENST00000585752 TIMM29Q9BSF4 260 aa18.41■□□□□ 0.54
ATG4D-203ENST00000585752 DDX47Q9H0S4 455 aaKnown RBP18.41■□□□□ 0.54
ATG4D-203ENST00000585752 ARNT2Q9HBZ2 717 aa18.41■□□□□ 0.54
ATG4D-203ENST00000585752 EIF2B3Q9NR50 452 aaKnown RBP18.41■□□□□ 0.54
ATG4D-203ENST00000585752 FOXJ2Q9P0K8 574 aa18.41■□□□□ 0.54
ATG4D-203ENST00000585752 KLHL3Q9UH77 587 aa18.41■□□□□ 0.54
ATG4D-203ENST00000585752 ASIC3Q9UHC3 531 aa18.41■□□□□ 0.54
ATG4D-203ENST00000585752 ARL5AQ9Y689 179 aa18.41■□□□□ 0.54
ATG4D-203ENST00000585752 GLYATL1P3A0A0U1RQE8 302 aa18.4■□□□□ 0.54
ATG4D-203ENST00000585752 C9orf172C9J069 976 aa18.4■□□□□ 0.54
ATG4D-203ENST00000585752 CHUKO15111 745 aa18.4■□□□□ 0.54
ATG4D-203ENST00000585752 KCNJ13O60928 360 aa18.4■□□□□ 0.54
ATG4D-203ENST00000585752 FGF3P11487 239 aaPredicted RBP18.4■□□□□ 0.54
ATG4D-203ENST00000585752 AKT1P31749 480 aa18.4■□□□□ 0.54
ATG4D-203ENST00000585752 CSF2RBP32927 897 aa18.4■□□□□ 0.54
ATG4D-203ENST00000585752 ATP13A5Q4VNC0 1218 aa18.4■□□□□ 0.54
ATG4D-203ENST00000585752 KIAA1614Q5VZ46 1190 aa18.4■□□□□ 0.54
ATG4D-203ENST00000585752 FAM151BQ6UXP7 276 aa18.4■□□□□ 0.54
ATG4D-203ENST00000585752 PLXDC1Q8IUK5 500 aa18.4■□□□□ 0.54
ATG4D-203ENST00000585752 TTC30BQ8N4P2 665 aa18.4■□□□□ 0.54
ATG4D-203ENST00000585752 OR52K1Q8NGK4 314 aa18.4■□□□□ 0.54
ATG4D-203ENST00000585752 SNRNP27Q8WVK2 155 aaKnown RBP18.4■□□□□ 0.54
ATG4D-203ENST00000585752 ART4Q93070 314 aa18.4■□□□□ 0.54
ATG4D-203ENST00000585752 PIH1D1Q9NWS0 290 aaKnown RBP18.4■□□□□ 0.54
ATG4D-203ENST00000585752 TMEM9Q9P0T7 183 aa18.4■□□□□ 0.54
ATG4D-203ENST00000585752 IGSF10Q6WRI0 2623 aa18.4■□□□□ 0.54
ATG4D-203ENST00000585752 BUD23O43709 281 aaKnown RBP18.39■□□□□ 0.53
ATG4D-203ENST00000585752 URI1O94763 535 aaPredicted RBP18.39■□□□□ 0.53
ATG4D-203ENST00000585752 SUN1O94901 812 aa18.39■□□□□ 0.53
ATG4D-203ENST00000585752 TPH1P17752 444 aa18.39■□□□□ 0.53
ATG4D-203ENST00000585752 XRCC1P18887 633 aaPredicted RBP18.39■□□□□ 0.53
ATG4D-203ENST00000585752 HADHAP40939 763 aa18.39■□□□□ 0.53
ATG4D-203ENST00000585752 CDK16Q00536 496 aa18.39■□□□□ 0.53
ATG4D-203ENST00000585752 CKAP4Q07065 602 aaKnown RBP18.39■□□□□ 0.53
ATG4D-203ENST00000585752 POU6F1Q14863 301 aa18.39■□□□□ 0.53
ATG4D-203ENST00000585752 DENND5AQ6IQ26 1287 aa18.39■□□□□ 0.53
ATG4D-203ENST00000585752 JPH3Q8WXH2 748 aaPredicted RBP18.39■□□□□ 0.53
ATG4D-203ENST00000585752 TEFMQ96QE5 360 aaKnown RBP18.39■□□□□ 0.53
ATG4D-203ENST00000585752 DDA1Q9BW61 102 aa18.39■□□□□ 0.53
ATG4D-203ENST00000585752 TBC1D10AQ9BXI6 508 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms