RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 MLLT10P55197 1068 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 UBE2IP63279 158 aaKnown RBP10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 KLF1Q13351 362 aaPredicted RBP10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 PDK2Q15119 407 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 CYP1B1Q16678 543 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 LONRF2Q1L5Z9 754 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 HENMT1Q5T8I9 393 aaKnown RBP10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 ATP1A1-AS1Q5TC04 95 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 TMEM26Q6ZUK4 368 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 PPP1R3BQ86XI6 285 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 GALNT6Q8NCL4 622 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 GALNT11Q8NCW6 608 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 MAML1Q92585 1016 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 FATE1Q969F0 183 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 TGM7Q96PF1 710 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 PLEKHG4BQ96PX9 1271 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 TWSG1Q9GZX9 223 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 ZNF768Q9H5H4 540 aaKnown RBP10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 PCDH9Q9HC56 1237 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 PCDH18Q9HCL0 1135 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 TRIM39Q9HCM9 518 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 PDE7BQ9NP56 450 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 HOMER3Q9NSC5 361 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 KLC4Q9NSK0 619 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 POT1Q9NUX5 634 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 LNPEPQ9UIQ6 1025 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 CNOT6Q9ULM6 557 aaKnown RBP10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 PCDHGA6Q9Y5G7 932 aa10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 MRPS18BQ9Y676 258 aaKnown RBP10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 ZFC3H1O60293 1989 aaKnown RBP10.57□□□□□ -0.72
CSNK1D-226ENST00000585026 SPTAN1Q13813 2472 aaKnown RBP10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 UQCRHLA0A096LP55 91 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 PDZK1P1A8MUH7 402 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 DYNC1I1O14576 645 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 KMOO15229 486 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 CREG1O75629 220 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 SLC25A14O95258 325 aaPredicted RBP10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 UQCRHP07919 91 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 FGF5P12034 268 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 TYRP1P17643 537 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 VCLP18206 1134 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 F8A1P23610 371 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 KDELR1P24390 212 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 CDKN2BP42772 138 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 SSR1P43307 286 aaKnown RBP10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 PDE1BQ01064 536 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 DSC2Q02487 901 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 GALNT2Q10471 571 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 DNASE1L3Q13609 305 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 SIX1Q15475 284 aaPredicted RBP10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 INSCQ1MX18 579 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 ERCC6LQ2NKX8 1250 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 ATP13A4Q4VNC1 1196 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 TFDP3Q5H9I0 405 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 CACHD1Q5VU97 1274 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 PDPK2PQ6A1A2 396 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 KLHL35Q6PF15 583 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 PRSS42Q7Z5A4 293 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 BPHLQ86WA6 291 aaPredicted RBP10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 APLFQ8IW19 511 aaPredicted RBP10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 MAP7D3Q8IWC1 876 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 NOA1Q8NC60 698 aaKnown RBP10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 THAP4Q8WY91 577 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 RAPGEF5Q92565 580 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 FCRL4Q96PJ5 515 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 TSGA13Q96PP4 275 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 ZSCAN5AQ9BUG6 496 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 SPATA16Q9BXB7 569 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 OSBPL8Q9BZF1 889 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 ZFYVE1Q9HBF4 777 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 ATXN10Q9UBB4 475 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 TLK1Q9UKI8 766 aa10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 G3BP2Q9UN86 482 aaKnown RBP10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 OAS3Q9Y6K5 1087 aaKnown RBP10.56□□□□□ -0.72
CSNK1D-226ENST00000585026 RP1L1Q8IWN7 2480 aaPredicted RBP10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 GOLGA6L10A0A0M3HER8 536 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 FADS2P1A8MWK0 482 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 ANKRD66B4E2M5 251 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 SPAG6O75602 509 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 TJP3O95049 919 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 PRLP01236 227 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 ZNF28P17035 718 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 ZNF8P17098 575 aaPredicted RBP10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 IDSP22304 550 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 VARSP26640 1264 aaKnown RBP10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 SEPHS1P49903 392 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 GFERP55789 205 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 PAFAH1B3Q15102 231 aaKnown RBP10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 AADACL2Q6P093 401 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 MFSD7Q6UXD7 560 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 SPOCD1Q6ZMY3 1216 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 LRRTM4Q86VH4 590 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 PRELID2Q8N945 189 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 SLCO2A1Q92959 643 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 FAF2Q96CS3 445 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 CXorf40BQ96DE9 158 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 ELMO2Q96JJ3 720 aa10.55□□□□□ -0.72
CSNK1D-226ENST00000585026 RUNDC3BQ96NL0 473 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms