RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 GPN3Q9UHW5 284 aaPredicted RBP8.28□□□□□ -1.08
SRSF1-207ENST00000584668 CNOT6Q9ULM6 557 aaKnown RBP8.28□□□□□ -1.08
SRSF1-207ENST00000584668 PCYT1BQ9Y5K3 369 aaPredicted RBP8.28□□□□□ -1.08
SRSF1-207ENST00000584668 ZFHX3Q15911 3703 aa8.28□□□□□ -1.08
SRSF1-207ENST00000584668 CELSR1Q9NYQ6 3014 aa8.28□□□□□ -1.08
SRSF1-207ENST00000584668 APCP25054 2843 aa8.28□□□□□ -1.08
SRSF1-207ENST00000584668 POLQO75417 2590 aa8.27□□□□□ -1.08
SRSF1-207ENST00000584668 ADGRG4Q8IZF6 3080 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 IGHV5-51A0A0C4DH38 117 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 OR5K3A6NET4 321 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 OR52A4PA6NMU1 304 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 ANKRD66B4E2M5 251 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 CDK14O94921 469 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 SLC4A1P02730 911 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 MYBL1P10243 752 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 POU3F2P20265 443 aaPredicted RBP8.27□□□□□ -1.09
SRSF1-207ENST00000584668 MX2P20592 715 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 AMPD1P23109 780 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 TNNT3P45378 269 aaPredicted RBP8.27□□□□□ -1.09
SRSF1-207ENST00000584668 DRG2P55039 364 aaKnown RBP8.27□□□□□ -1.09
SRSF1-207ENST00000584668 OGDHQ02218 1023 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 GPS2Q13227 327 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 XRCC4Q13426 336 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 MYBPC3Q14896 1274 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 NCF4Q15080 339 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 ZRSR2Q15696 482 aaKnown RBP8.27□□□□□ -1.09
SRSF1-207ENST00000584668 SMTNL2Q2TAL5 461 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 ALS2CLQ60I27 953 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 HGSNATQ68CP4 663 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 PLEKHA7Q6IQ23 1121 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 IGFL3Q6UXB1 125 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 ZNF517Q6ZMY9 492 aaPredicted RBP8.27□□□□□ -1.09
SRSF1-207ENST00000584668 POLNQ7Z5Q5 900 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 ADGRG6Q86SQ4 1221 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 DSELQ8IZU8 1212 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.27□□□□□ -1.09
SRSF1-207ENST00000584668 N4BP2L2Q92802 583 aaPredicted RBP8.27□□□□□ -1.09
SRSF1-207ENST00000584668 FATE1Q969F0 183 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 C19orf60Q96EN9 201 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 CSPG4P5Q96PW8 444 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 RUFY1Q96T51 708 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 MAP3K3Q99759 626 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 ACTR5Q9H9F9 607 aaPredicted RBP8.27□□□□□ -1.09
SRSF1-207ENST00000584668 SUCOQ9UBS9 1254 aaKnown RBP8.27□□□□□ -1.09
SRSF1-207ENST00000584668 ADGRG1Q9Y653 693 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 NUP210LQ5VU65 1888 aa8.27□□□□□ -1.09
SRSF1-207ENST00000584668 PIKFYVEQ9Y2I7 2098 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 F8P00451 2351 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 PCM1Q15154 2024 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 A0A0U1RQS6 177 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 KLHL33A6NCF5 533 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 TMEM191CA6NGB0 347 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 TMCO5BA8MYB1 307 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 F5H423 210 aaPredicted RBP8.26□□□□□ -1.09
SRSF1-207ENST00000584668 MATN3O15232 486 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 LRRTM2O43300 516 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 EDN3P14138 238 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 CDH3P22223 829 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 GRNP28799 593 aaKnown RBP8.26□□□□□ -1.09
SRSF1-207ENST00000584668 OTX2P32243 289 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 FOLR3P41439 243 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 DSC2Q02487 901 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 RAPSNQ13702 412 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 ATP1A4Q13733 1029 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 LAMB3Q13751 1172 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 PIGHQ14442 188 aaPredicted RBP8.26□□□□□ -1.09
SRSF1-207ENST00000584668 KRT33BQ14525 404 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 PTPRRQ15256 657 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 IFI16Q16666 785 aaKnown RBP8.26□□□□□ -1.09
SRSF1-207ENST00000584668 CYP2A13Q16696 494 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 DPCR1Q3MIW9 517 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 PLEKHN1Q494U1 663 aaPredicted RBP8.26□□□□□ -1.09
SRSF1-207ENST00000584668 ZDHHC20Q5W0Z9 365 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 FCRL6Q6DN72 434 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 CCDC70Q6NSX1 233 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 MTFR2Q6P444 385 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 AMZ2Q86W34 360 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 SYTL1Q8IYJ3 562 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 GPR135Q8IZ08 494 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 GALNT16Q8N428 558 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 CPLX3Q8WVH0 158 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 ZFPM2Q8WW38 1151 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 ZNF653Q96CK0 615 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 ZNF501Q96CX3 271 aaPredicted RBP8.26□□□□□ -1.09
SRSF1-207ENST00000584668 VPS50Q96JG6 964 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 AGAP3Q96P47 875 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 VPS35Q96QK1 796 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 WDR77Q9BQA1 342 aaPredicted RBP8.26□□□□□ -1.09
SRSF1-207ENST00000584668 GPR63Q9BZJ6 419 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 UNKQ9C0B0 810 aaKnown RBP8.26□□□□□ -1.09
SRSF1-207ENST00000584668 ARFGAP3Q9NP61 516 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 CHST11Q9NPF2 352 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 SAMSN1Q9NSI8 373 aaKnown RBP8.26□□□□□ -1.09
SRSF1-207ENST00000584668 RBM22Q9NW64 420 aaKnown RBP eCLIP8.26□□□□□ -1.09
SRSF1-207ENST00000584668 HRASLS2Q9NWW9 162 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.26□□□□□ -1.092e-6■■□□□ 11.6
SRSF1-207ENST00000584668 COPG2Q9UBF2 871 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 TRIM10Q9UDY6 481 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 NDOR1Q9UHB4 597 aa8.26□□□□□ -1.09
SRSF1-207ENST00000584668 SERTAD3Q9UJW9 196 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms