RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, human

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-217	ENST00000583705	DAGLB	Q8NCG7	672 aa		11.19	□□□□□ -0.62
MSI2-217	ENST00000583705	GALNT11	Q8NCW6	608 aa		11.19	□□□□□ -0.62
MSI2-217	ENST00000583705	PRDM12	Q9H4Q4	367 aa		11.19	□□□□□ -0.62
MSI2-217	ENST00000583705	RWDD3	Q9Y3V2	267 aa		11.19	□□□□□ -0.62
MSI2-217	ENST00000583705	TREH	O43280	583 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	GLRA2	P23416	452 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	ACVR2A	P27037	513 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	ASMT	P46597	345 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	OR3A3	P47888	321 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	OR3A2	P47893	321 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	OGFRL1	Q5TC84	451 aa	Predicted RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	NAPRT	Q6XQN6	538 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	EIF1AD	Q8N9N8	165 aa	Known RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	FNIP1	Q8TF40	1166 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	ZNF224	Q9NZL3	707 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	CCL22	O00626	93 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	LRIG2	O94898	1065 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	LDOC1	O95751	146 aa	Predicted RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	MLLT1	Q03111	559 aa	Predicted RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	TRIM28	Q13263	835 aa	Known RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	GRM2	Q14416	872 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	AMER2	Q8N7J2	671 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	OR5T2	Q8NGG2	359 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	CNDP2	Q96KP4	475 aa	Known RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	PPM1M	Q96MI6	270 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	ACO2	Q99798	780 aa	Known RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	SNTG1	Q9NSN8	517 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	BLOC1S4	Q9NUP1	217 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	TRAFD1	O14545	582 aa	Predicted RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	MMP3	P08254	477 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	ITGA5	P08648	1049 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	RFX5	P48382	616 aa	Predicted RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	HSPA7	P48741	367 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	ADAM8	P78325	824 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	SLC34A1	Q06495	639 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	CDK18	Q07002	472 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	MTX3	Q5HYI7	312 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	GCNT6	Q5T4J0	391 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	KYAT3	Q6YP21	454 aa	Known RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	C1orf186	Q6ZWK4	172 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	TMEM126B	Q8IUX1	230 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	MMAA	Q8IVH4	418 aa	Known RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	CMTR2	Q8IYT2	770 aa	Known RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	SYNPO	Q8N3V7	929 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	POF1B	Q8WVV4	589 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	ZSCAN5A	Q9BUG6	496 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	TOR3A	Q9H497	397 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	FANCF	Q9NPI8	374 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	DDX4	Q9NQI0	724 aa	Known RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	ZNF639	Q9UID6	485 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	DGKB	Q9Y6T7	804 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	UNC13A	Q9UPW8	1703 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	BLK	P51451	505 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	PRKCD	Q05655	676 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	MPP2	Q14168	576 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	ZPBP2	Q6X784	338 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	PIK3C3	Q8NEB9	887 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	PNPLA8	Q9NP80	782 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	MALT1	Q9UDY8	824 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	MID1	O15344	667 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	KCNJ13	O60928	360 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	FAM153B	P0C7A2	387 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	HSD17B2	P37059	387 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	SPAM1	P38567	509 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	PBX3	P40426	434 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	CCR10	P46092	362 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	CDK7	P50613	346 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	CAV3	P56539	151 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	RRP1B	Q14684	758 aa	Known RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	GPR68	Q15743	365 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	DENND5A	Q6IQ26	1287 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	MRPL57	Q9BQC6	102 aa	Known RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	SERINC1	Q9NRX5	453 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	FKBP7	Q9Y680	259 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	PNPLA6	Q8IY17	1366 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705		C9JVG2	144 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	APOC4-APOC2	K7ER74	178 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	RPP14	O95059	124 aa	Known RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	APOC2	P02655	101 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	ITGB1	P05556	798 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	CXCR1	P25024	350 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	ADSS	P30520	456 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	DGKG	P49619	791 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	CLCNKB	P51801	687 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	ADAR	P55265	1226 aa	Known RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	CDK16	Q00536	496 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	ARSI	Q5FYB1	569 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	ERICH5	Q6P6B1	374 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	KIAA0895	Q8NCT3	520 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	THAP3	Q8WTV1	239 aa	Predicted RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	HTRA1	Q92743	480 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	IFT27	Q9BW83	186 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	SPATA6	Q9NWH7	488 aa	Predicted RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	CROCC2	H7BZ55	1655 aa		11.18	□□□□□ -0.62
MSI2-217	ENST00000583705	CLTC	Q00610	1675 aa	Known RBP	11.18	□□□□□ -0.62
MSI2-217	ENST00000583705		H3BUI4	141 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	REN	P00797	406 aa		11.17	□□□□□ -0.62
MSI2-217	ENST00000583705	TAS2R14	Q9NYV8	317 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms