RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 SERPINB9P50453 376 aa17.7■□□□□ 0.42
SNX11-212ENST00000583320 HNRNPKP61978 463 aaKnown RBP eCLIP17.7■□□□□ 0.42
SNX11-212ENST00000583320 POLR2LP62875 67 aaKnown RBP17.7■□□□□ 0.42
SNX11-212ENST00000583320 TMEM259Q4ZIN3 620 aa17.7■□□□□ 0.42
SNX11-212ENST00000583320 BRAT1Q6PJG6 821 aa17.7■□□□□ 0.42
SNX11-212ENST00000583320 CES3Q6UWW8 571 aa17.7■□□□□ 0.42
SNX11-212ENST00000583320 GDPD4Q6W3E5 623 aa17.7■□□□□ 0.42
SNX11-212ENST00000583320 LMNTD2Q8IXW0 634 aa17.7■□□□□ 0.42
SNX11-212ENST00000583320 OR6K2Q8NGY2 324 aa17.7■□□□□ 0.42
SNX11-212ENST00000583320 GABPB2Q8TAK5 448 aaPredicted RBP17.7■□□□□ 0.42
SNX11-212ENST00000583320 BLOC1S5Q8TDH9 187 aa17.7■□□□□ 0.42
SNX11-212ENST00000583320 PDCD6IPQ8WUM4 868 aaKnown RBP17.7■□□□□ 0.42
SNX11-212ENST00000583320 TLCD1Q96CP7 247 aa17.7■□□□□ 0.42
SNX11-212ENST00000583320 SGF29Q96ES7 293 aa17.7■□□□□ 0.42
SNX11-212ENST00000583320 ZDHHC6Q9H6R6 413 aa17.7■□□□□ 0.42
SNX11-212ENST00000583320 EVA1BQ9NVM1 165 aa17.7■□□□□ 0.42
SNX11-212ENST00000583320 IKBKGQ9Y6K9 419 aa17.7■□□□□ 0.42
SNX11-212ENST00000583320 TRPM6Q9BX84 2022 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 CCDC187A0A096LP49 1063 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 C2orf81A6NN90 581 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 A6NNZ2 444 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 KPNA3O00505 521 aaPredicted RBP17.69■□□□□ 0.42
SNX11-212ENST00000583320 CSF2P04141 144 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 NFKBIAP25963 317 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 SLCO1A2P46721 670 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 TTMPQ5BVD1 217 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 LGSNQ5TDP6 509 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 ESRP1Q6NXG1 681 aaKnown RBP17.69■□□□□ 0.42
SNX11-212ENST00000583320 NEK5Q6P3R8 708 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 USP53Q70EK8 1073 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 B3GNT8Q7Z7M8 397 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 KCNMB4Q86W47 210 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 CNTN4Q8IWV2 1026 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 CTAGE3PQ8IX95 158 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 PPM1NQ8N819 430 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 CHST14Q8NCH0 376 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 DCAKDQ8WVC6 231 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 ZNF778Q96MU6 729 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 SMYD2Q9NRG4 433 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 IL36AQ9UHA7 158 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 SPO11Q9Y5K1 396 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 WASF2Q9Y6W5 498 aa17.69■□□□□ 0.42
SNX11-212ENST00000583320 TEP1Q99973 2627 aaKnown RBP17.69■□□□□ 0.42
SNX11-212ENST00000583320 SPTY2D1-AS1A0A0U1RR47 76 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 SMIM23A6NLE4 172 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 SPINT1O43278 529 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 AQP9O43315 295 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 PRNPP04156 253 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 NTRK1P04629 796 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 HGFP14210 728 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 LPOP22079 712 aaPredicted RBP17.68■□□□□ 0.42
SNX11-212ENST00000583320 CNTFP26441 200 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 OAS2P29728 719 aaKnown RBP17.68■□□□□ 0.42
SNX11-212ENST00000583320 SLC5A2P31639 672 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 GKP32189 559 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 MLLT3P42568 568 aaPredicted RBP17.68■□□□□ 0.42
SNX11-212ENST00000583320 ARCN1P48444 511 aaKnown RBP17.68■□□□□ 0.42
SNX11-212ENST00000583320 TLE1Q04724 770 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 ILF2Q12905 390 aaKnown RBP17.68■□□□□ 0.42
SNX11-212ENST00000583320 EFTUD2Q15029 972 aaKnown RBP eCLIP17.68■□□□□ 0.426e-7■■■■■ 47.1
SNX11-212ENST00000583320 CNGA3Q16281 694 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 KYAT3Q6YP21 454 aaKnown RBP17.68■□□□□ 0.42
SNX11-212ENST00000583320 GLT6D1Q7Z4J2 308 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 SLC35F3Q8IY50 421 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 RBFAQ8N0V3 343 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 TTC30BQ8N4P2 665 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 TMIEQ8NEW7 156 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 CALML6Q8TD86 181 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 LMX1AQ8TE12 382 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 SCG3Q8WXD2 468 aaKnown RBP17.68■□□□□ 0.42
SNX11-212ENST00000583320 SGSM3Q96HU1 749 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 MCCC1Q96RQ3 725 aaPredicted RBP17.68■□□□□ 0.42
SNX11-212ENST00000583320 CPNE1Q99829 537 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 ARHGAP9Q9BRR9 750 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 FAM167BQ9BTA0 163 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 TCEAL2Q9H3H9 227 aaPredicted RBP17.68■□□□□ 0.42
SNX11-212ENST00000583320 CENPHQ9H3R5 247 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 PPANQ9NQ55 473 aaKnown RBP17.68■□□□□ 0.42
SNX11-212ENST00000583320 C20orf96Q9NUD7 363 aaPredicted RBP17.68■□□□□ 0.42
SNX11-212ENST00000583320 NLE1Q9NVX2 485 aaPredicted RBP17.68■□□□□ 0.42
SNX11-212ENST00000583320 SENP1Q9P0U3 644 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 ZFATQ9P243 1243 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 SCN8AQ9UQD0 1980 aa17.68■□□□□ 0.42
SNX11-212ENST00000583320 IQANK1A0A1B0GTG1 560 aa17.67■□□□□ 0.42
SNX11-212ENST00000583320 CXorf49A8MYA2 514 aaPredicted RBP17.67■□□□□ 0.42
SNX11-212ENST00000583320 FAM155BO75949 473 aa17.67■□□□□ 0.42
SNX11-212ENST00000583320 PCDH8O95206 1070 aa17.67■□□□□ 0.42
SNX11-212ENST00000583320 ITGB2P05107 769 aa17.67■□□□□ 0.42
SNX11-212ENST00000583320 UGT2B4P06133 528 aa17.67■□□□□ 0.42
SNX11-212ENST00000583320 ERVK-10P10266 1014 aa17.67■□□□□ 0.42
SNX11-212ENST00000583320 WT1P19544 449 aaPredicted RBP17.67■□□□□ 0.42
SNX11-212ENST00000583320 ZNF140P52738 457 aaPredicted RBP17.67■□□□□ 0.42
SNX11-212ENST00000583320 NR0B2Q15466 257 aa17.67■□□□□ 0.42
SNX11-212ENST00000583320 ZNF805Q5CZA5 627 aa17.67■□□□□ 0.42
SNX11-212ENST00000583320 TEDDM1Q5T9Z0 273 aa17.67■□□□□ 0.42
SNX11-212ENST00000583320 USP45Q70EL2 814 aa17.67■□□□□ 0.42
SNX11-212ENST00000583320 TAOK1Q7L7X3 1001 aa17.67■□□□□ 0.42
SNX11-212ENST00000583320 PARGQ86W56 976 aa17.67■□□□□ 0.42
SNX11-212ENST00000583320 PAF1Q8N7H5 531 aa17.67■□□□□ 0.42
SNX11-212ENST00000583320 OR13J1Q8NGT2 312 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms