RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 LPGAT1Q92604 370 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 DGAT2Q96PD7 388 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 TMEM30AQ9NV96 361 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 AMACRQ9UHK6 382 aa4.56□□□□□ -1.68
SMCHD1-205ENST00000581383 A0A0G2JPF8 293 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 A0A1W2PP11 408 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 DENND3A2RUS2 1198 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 MAGEB17A8MXT2 336 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 HNRNPCL3B7ZW38 293 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 PLK4O00444 970 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 UBE2CO00762 179 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 ZBTB11O95625 1053 aaPredicted RBP4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 HNRNPCL4P0DMR1 293 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 VPREB1P12018 145 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 GJA1P17302 382 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 DNASE1P24855 282 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 GNL1P36915 607 aaPredicted RBP4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 AMPHP49418 695 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 PPP5CP53041 499 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 KEAP1Q14145 624 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 SLC39A14Q15043 492 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 TMEM35AQ53FP2 167 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 C9orf152Q5JTZ5 239 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 DHRS7BQ6IAN0 325 aaPredicted RBP4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 PLPPR4Q7Z2D5 763 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 TMPRSS12Q86WS5 348 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 FBXO39Q8N4B4 442 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 GCSAMQ8N6F7 178 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 RBM15BQ8NDT2 890 aaKnown RBP4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 LILRB1Q8NHL6 650 aaPredicted RBP4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 RADILQ96JH8 1075 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 ADGRG7Q96K78 797 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 CNDP2Q96KP4 475 aaKnown RBP4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 KRTAP4-4Q9BYR3 166 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 SEMA6AQ9H2E6 1030 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 LRMDAQ9H2I8 198 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 GOLPH3LQ9H4A5 285 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 DENND2DQ9H6A0 471 aaPredicted RBP4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 GAREM1Q9H706 876 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 CCDC177Q9NQR7 707 aaPredicted RBP4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 GDE1Q9NZC3 331 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 RCC2Q9P258 522 aaKnown RBP4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 BCCIPQ9P287 314 aaKnown RBP eCLIP4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 CFDP1Q9UEE9 299 aaPredicted RBP4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 OR2W1Q9Y3N9 320 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 ZNF711Q9Y462 761 aa4.55□□□□□ -1.68
SMCHD1-205ENST00000581383 LILRA5A6NI73 299 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 HNRNPCL2B2RXH8 293 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 ZNF587BE7ETH6 402 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 ZNF500O60304 480 aaPredicted RBP4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 DKC1O60832 514 aaKnown RBP eCLIP4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 ITGA2P17301 1181 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 NR2F2P24468 414 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 CDH13P55290 713 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 SIRPAP78324 504 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 SNTB1Q13884 538 aaKnown RBP4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 IL11RAQ14626 422 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 KYNUQ16719 465 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 C9orf50Q5SZB4 431 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 ERMARDQ5T6L9 678 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 TMEM211Q6ICI0 200 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 TRNP1Q6NT89 227 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 TEX38Q6PEX7 206 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 GFRALQ6UXV0 394 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 ADIPOR2Q86V24 386 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 CEP57Q86XR8 500 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 TMEM219Q86XT9 240 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 FOXP4Q8IVH2 680 aaPredicted RBP4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 WDR20Q8TBZ3 569 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 TAS1R2Q8TE23 839 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 PPP4R1Q8TF05 950 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 FIG4Q92562 907 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 RTP4Q96DX8 246 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 CDCA5Q96FF9 252 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 PGAP3Q96FM1 320 aaPredicted RBP4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 BAG1Q99933 345 aaPredicted RBP4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 CSTL1Q9H114 145 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 UBTD1Q9HAC8 227 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 KLHL9Q9P2J3 617 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 CRNNQ9UBG3 495 aaPredicted RBP4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 GIMAP2Q9UG22 337 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 ANAPC2Q9UJX6 822 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 VDAC3Q9Y277 283 aa4.54□□□□□ -1.68
SMCHD1-205ENST00000581383 TMEM178BH3BS89 294 aa4.53□□□□□ -1.68
SMCHD1-205ENST00000581383 LINC01565O15544 149 aa4.53□□□□□ -1.68
SMCHD1-205ENST00000581383 LDB3O75112 727 aa4.53□□□□□ -1.68
SMCHD1-205ENST00000581383 CREG1O75629 220 aa4.53□□□□□ -1.68
SMCHD1-205ENST00000581383 APOA4P06727 396 aa4.53□□□□□ -1.68
SMCHD1-205ENST00000581383 POLR2CP19387 275 aaPredicted RBP4.53□□□□□ -1.68
SMCHD1-205ENST00000581383 ART1P52961 327 aa4.53□□□□□ -1.68
SMCHD1-205ENST00000581383 CTSCP53634 463 aa4.53□□□□□ -1.68
SMCHD1-205ENST00000581383 SNRPEP62304 92 aaKnown RBP4.53□□□□□ -1.68
SMCHD1-205ENST00000581383 RELQ04864 619 aaPredicted RBP4.53□□□□□ -1.68
SMCHD1-205ENST00000581383 KIF5AQ12840 1032 aa4.53□□□□□ -1.68
SMCHD1-205ENST00000581383 ZNF234Q14588 700 aa4.53□□□□□ -1.68
SMCHD1-205ENST00000581383 MELKQ14680 651 aa4.53□□□□□ -1.68
SMCHD1-205ENST00000581383 SNAPC1Q16533 368 aa4.53□□□□□ -1.68
SMCHD1-205ENST00000581383 LETM2Q2VYF4 491 aa4.53□□□□□ -1.68
SMCHD1-205ENST00000581383 C6orf163Q5TEZ5 329 aa4.53□□□□□ -1.68
SMCHD1-205ENST00000581383 GFI1BQ5VTD9 330 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms