RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 GTF2H3Q13889 308 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 PRKD1Q15139 912 aaPredicted RBP10.39□□□□□ -0.75
RFFL-209ENST00000581265 TCEAL1Q15170 157 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 TAZQ16635 292 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 IRGCQ6NXR0 463 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 KLHL35Q6PF15 583 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 FAM92BQ6ZTR7 304 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 B4GALNT4Q76KP1 1039 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 AMZ2Q86W34 360 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 TRAPPC5Q8IUR0 188 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 APLFQ8IW19 511 aaPredicted RBP10.39□□□□□ -0.75
RFFL-209ENST00000581265 RHOT2Q8IXI1 618 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 TTC30BQ8N4P2 665 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 GDAP1Q8TB36 358 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 UBXN4Q92575 508 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 RNF25Q96BH1 459 aaPredicted RBP10.39□□□□□ -0.75
RFFL-209ENST00000581265 ELMO2Q96JJ3 720 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 DEF6Q9H4E7 631 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 PDE7BQ9NP56 450 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 LHX9Q9NQ69 397 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 DDX56Q9NY93 547 aaKnown RBP10.39□□□□□ -0.75
RFFL-209ENST00000581265 UBP1Q9NZI7 540 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 HACD3Q9P035 362 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 IL17CQ9P0M4 197 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 TRIM10Q9UDY6 481 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 FAM153AQ9UHL3 310 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 LNPEPQ9UIQ6 1025 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 VPS4AQ9UN37 437 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 TP53TG5Q9Y2B4 290 aa10.39□□□□□ -0.75
RFFL-209ENST00000581265 IGHV5-51A0A0C4DH38 117 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 PIPSLA2A3N6 862 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 C21orf140B9A014 251 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 MTSS1O43312 755 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 UGT1A9O60656 530 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 KATNA1O75449 491 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 KRT1P04264 644 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 TPM3P06753 285 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 FOLR1P15328 257 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 UGT1A6P19224 532 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 UGT1A1P22309 533 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 UGT1A4P22310 534 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 CDKN2BP42772 138 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 CD97P48960 835 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 PMS2P54278 862 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 WNT3AP56704 352 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 DYNLT1P63172 113 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 DNASE1L3Q13609 305 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 RPE65Q16518 533 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 SIRPB2Q5JXA9 342 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 LDLRAP1Q5SW96 308 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 METRNLQ641Q3 311 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 PWWP2BQ6NUJ5 590 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 KDELC1Q6UW63 502 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 MFSD7Q6UXD7 560 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 KMT5CQ86Y97 462 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 RFX6Q8HWS3 928 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 RHOT1Q8IXI2 618 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 RASGEF1AQ8N9B8 481 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 TEX19Q8NA77 164 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 SSC4DQ8WTU2 575 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 TFB1MQ8WVM0 346 aaKnown RBP10.38□□□□□ -0.75
RFFL-209ENST00000581265 ZFPM2Q8WW38 1151 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 MIB2Q96AX9 1013 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 CHP1Q99653 195 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 GPR87Q9BY21 358 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 UGT1A7Q9HAW7 530 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 UGT1A10Q9HAW8 530 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 UGT1A8Q9HAW9 530 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 ZNHIT6Q9NWK9 470 aaKnown RBP10.38□□□□□ -0.75
RFFL-209ENST00000581265 SAE1Q9UBE0 346 aaPredicted RBP10.38□□□□□ -0.75
RFFL-209ENST00000581265 TLK1Q9UKI8 766 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 RARRES3Q9UL19 164 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 ANKRD17O75179 2603 aaKnown RBP10.38□□□□□ -0.75
RFFL-209ENST00000581265 RELNP78509 3460 aa10.38□□□□□ -0.75
RFFL-209ENST00000581265 SPTBN1Q01082 2364 aaKnown RBP10.37□□□□□ -0.75
RFFL-209ENST00000581265 GLYATL1P3A0A0U1RQE8 302 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 SEC16AO15027 2179 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 RFPL1O75677 317 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 TIAF1O95411 115 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 SPAM1P38567 509 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 CTSCP53634 463 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 PPP1CAP62136 330 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 ACY1Q03154 408 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 TUBB3Q13509 450 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 TRIM14Q14142 442 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 TFDP2Q14188 446 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 CHRNA6Q15825 494 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 ODF2Q5BJF6 829 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 ZNF787Q6DD87 383 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 TMEM220Q6QAJ8 160 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 FAM83HQ6ZRV2 1179 aaPredicted RBP10.37□□□□□ -0.75
RFFL-209ENST00000581265 ASB18Q6ZVZ8 466 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 TMEM135Q86UB9 458 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 EFCAB3Q8N7B9 438 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 BEND7Q8N7W2 519 aaPredicted RBP10.37□□□□□ -0.75
RFFL-209ENST00000581265 SIDT2Q8NBJ9 832 aaKnown RBP10.37□□□□□ -0.75
RFFL-209ENST00000581265 DDHD1Q8NEL9 900 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 CT55Q8WUE5 264 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 SEC14L1Q92503 715 aa10.37□□□□□ -0.75
RFFL-209ENST00000581265 RNF31Q96EP0 1072 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms