RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 RETREG1Q9H6L5 497 aa13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 SP110Q9HB58 689 aa13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 NPDC1Q9NQX5 325 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 FAM207AQ9NSI2 230 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 KIAA1468Q9P260 1216 aa13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 LUC7L2Q9Y383 392 aaKnown RBP13.68□□□□□ -0.22
CSNK1D-213ENST00000580446 SLC9B1P1A6NJY1 282 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 ZNF749O43361 778 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 WIPF1O43516 503 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 MTA2O94776 668 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 MYL1P05976 194 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 PDHA1P08559 390 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 FOLH1Q04609 750 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 SLC10A7Q0GE19 358 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 TMTC4Q5T4D3 741 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 TRIM72Q6ZMU5 477 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 USP45Q70EL2 814 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 PGBD5Q8N414 524 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 FAM172AQ8WUF8 416 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 CPLX3Q8WVH0 158 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 SDCCAG3Q96C92 435 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 SCRN2Q96FV2 425 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 AGAP3Q96P47 875 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 MCCC1Q96RQ3 725 aaPredicted RBP13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 TSPAN10Q9H1Z9 355 aaPredicted RBP13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 PDCL3Q9H2J4 239 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 GPATCH2LQ9NWQ4 482 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 MEMO1Q9Y316 297 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 ADGRG1Q9Y653 693 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 VPS13CQ709C8 3753 aa13.67□□□□□ -0.22
CSNK1D-213ENST00000580446 CCDC66A2RUB6 948 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 NKX2-6A6NCS4 301 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 K7ELQ4 463 aaPredicted RBP13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 AGPSO00116 658 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 MTX2O75431 263 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 ZBTB11O95625 1053 aaPredicted RBP13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 LY6G6DO95868 133 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 INHBBP09529 407 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 AGXTP21549 392 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 SDC4P31431 198 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 GABRB2P47870 512 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 LMAN1P49257 510 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 NDUFA8P51970 172 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 KPNA2P52292 529 aaKnown RBP13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 STX17P56962 302 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 ARG2P78540 354 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 LONRF1Q17RB8 773 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 IRAK1BP1Q5VVH5 260 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 SCYL2Q6P3W7 929 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 KMT5CQ86Y97 462 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 DNAAF3Q8N9W5 541 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 OR8K5Q8NH50 307 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 COG1Q8WTW3 980 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 CPA5Q8WXQ8 436 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 THOC3Q96J01 351 aaKnown RBP13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 C18orf12Q96KH6 178 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 HRASLS2Q9NWW9 162 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 GPN3Q9UHW5 284 aaPredicted RBP13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 ST6GALNAC2Q9UJ37 374 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 PSMD13Q9UNM6 376 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 NCOA6Q14686 2063 aaPredicted RBP13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 SPTBP11277 2137 aa13.66□□□□□ -0.22
CSNK1D-213ENST00000580446 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 OR6C74A6NCV1 312 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 OR5K3A6NET4 321 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 P4HA2O15460 535 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 PGLSO95336 258 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 CLDN7O95471 211 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 IGHEP01854 428 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 HEXAP06865 529 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 ZNF7P17097 686 aaPredicted RBP13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 SLC9A1P19634 815 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 HADHAP40939 763 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 STC1P52823 247 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 RBPJQ06330 500 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 MYBPHQ13203 477 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 DSG2Q14126 1118 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 ARMC12Q5T9G4 340 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 RPUSD3Q6P087 351 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 SLFN11Q7Z7L1 901 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 TMEM35BQ8NCS4 154 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 OR2Y1Q8NGV0 311 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 CA5BP1Q8WTZ4 195 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 PIH1D2Q8WWB5 315 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 NINJ1Q92982 152 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 CARD9Q9H257 536 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 FANCEQ9HB96 536 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 DNAJB12Q9NXW2 375 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 HPSEQ9Y251 543 aa13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 CFAP20Q9Y6A4 193 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-213ENST00000580446 PROM1O43490 865 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 SOCS5O75159 536 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 ZWINTO95229 277 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 CTSBP07858 339 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 SYKP43405 635 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 PREPP48147 710 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 CLCNKAP51800 687 aa13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 NSUN2Q08J23 767 aaKnown RBP eCLIP13.64□□□□□ -0.23
CSNK1D-213ENST00000580446 MFAP5Q13361 173 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms