RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 WSCD2Q2TBF2 565 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 PLEKHS1Q5SXH7 462 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 CGB2Q6NT52 195 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 PNCKQ6P2M8 343 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 ADAMTSL2Q86TH1 951 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 RASGEF1AQ8N9B8 481 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 HIC2Q96JB3 615 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 NELL2Q99435 816 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 GATA5Q9BWX5 397 aaPredicted RBP18.28■□□□□ 0.52
PRKCA-203ENST00000578063 TRIM39Q9HCM9 518 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 TMCO1Q9UM00 188 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 KRBA1A5PL33 1030 aa18.27■□□□□ 0.52
PRKCA-203ENST00000578063 CDC7O00311 574 aa18.27■□□□□ 0.52
PRKCA-203ENST00000578063 VEGFDO43915 354 aa18.27■□□□□ 0.52
PRKCA-203ENST00000578063 PCCBP05166 539 aa18.27■□□□□ 0.52
PRKCA-203ENST00000578063 ABCE1P61221 599 aaKnown RBP18.27■□□□□ 0.52
PRKCA-203ENST00000578063 BCL7AQ4VC05 210 aa18.27■□□□□ 0.52
PRKCA-203ENST00000578063 ACSBG2Q5FVE4 666 aa18.27■□□□□ 0.52
PRKCA-203ENST00000578063 ZNF648Q5T619 568 aaPredicted RBP18.27■□□□□ 0.52
PRKCA-203ENST00000578063 PIWIL4Q7Z3Z4 852 aaKnown RBP18.27■□□□□ 0.52
PRKCA-203ENST00000578063 CRLF3Q8IUI8 442 aa18.27■□□□□ 0.52
PRKCA-203ENST00000578063 UBALD2Q8IYN6 164 aa18.27■□□□□ 0.52
PRKCA-203ENST00000578063 CACNA2D3Q8IZS8 1091 aa18.27■□□□□ 0.52
PRKCA-203ENST00000578063 CCDC197Q8NCU1 140 aa18.27■□□□□ 0.52
PRKCA-203ENST00000578063 PPP4R1Q8TF05 950 aa18.27■□□□□ 0.52
PRKCA-203ENST00000578063 ASB12Q8WXK4 309 aa18.27■□□□□ 0.52
PRKCA-203ENST00000578063 FUBP1Q96AE4 644 aaKnown RBP18.27■□□□□ 0.52
PRKCA-203ENST00000578063 COX14Q96I36 57 aa18.27■□□□□ 0.52
PRKCA-203ENST00000578063 SEC16BQ96JE7 1060 aa18.27■□□□□ 0.52
PRKCA-203ENST00000578063 ZNF514Q96K75 400 aaPredicted RBP18.27■□□□□ 0.52
PRKCA-203ENST00000578063 MBD1Q9UIS9 605 aaPredicted RBP18.27■□□□□ 0.52
PRKCA-203ENST00000578063 ATG2BQ96BY7 2078 aa18.27■□□□□ 0.52
PRKCA-203ENST00000578063 TBC1D3DA0A087WVF3 549 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 TBC1D3IA0A087WXS9 549 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 TBC1D3EA0A087X179 549 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 TBC1D3KA0A087X1G2 549 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 TBC1D3FA6NER0 549 aaPredicted RBP18.26■□□□□ 0.51
PRKCA-203ENST00000578063 NEMP2A6NFY4 417 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 OR2AG2A6NM03 316 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 TBC1D3LB9A6J9 549 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 CDK14O94921 469 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 TBC1D3HP0C7X1 549 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 SERPINB5P36952 375 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 KCNC1P48547 511 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 TPMTP51580 245 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 CTSCP53634 463 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 GBX1Q14549 363 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 UBXN2BQ14CS0 331 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 TBC1D3GQ6DHY5 549 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 TBC1D3CQ6IPX1 549 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 NAPRTQ6XQN6 538 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 TBC1D3Q8IZP1 549 aaPredicted RBP18.26■□□□□ 0.51
PRKCA-203ENST00000578063 TP53I13Q8NBR0 393 aaPredicted RBP18.26■□□□□ 0.51
PRKCA-203ENST00000578063 PLA2G15Q8NCC3 412 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 HMGB4Q8WW32 186 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 EXT2Q93063 718 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 SLC17A9Q9BYT1 436 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 TRIM55Q9BYV6 548 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 OSBPL6Q9BZF3 934 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 NCKIPSDQ9NZQ3 722 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 KLHL14Q9P2G3 628 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 IKZF3Q9UKT9 509 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 PRR23AA6NEV1 266 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 NUAK1O60285 661 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 SNUPNO95149 360 aaKnown RBP18.26■□□□□ 0.51
PRKCA-203ENST00000578063 GSTM1P09488 218 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 NAGLUP54802 743 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 CDK3Q00526 305 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 GSTM4Q03013 218 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 FGL2Q14314 439 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 IRF4Q15306 451 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 TMEM220Q6QAJ8 160 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 TRIM67Q6ZTA4 783 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 RAB44Q7Z6P3 723 aaPredicted RBP18.26■□□□□ 0.51
PRKCA-203ENST00000578063 ADGRG6Q86SQ4 1221 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 TRIM74Q86UV6 250 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 FAM124AQ86V42 546 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 HEATR4Q86WZ0 1026 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 ANKS4BQ8N8V4 417 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 FLCNQ8NFG4 579 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 ASZ1Q8WWH4 475 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 ELMO1Q92556 727 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 LENG8Q96PV6 779 aaPredicted RBP18.26■□□□□ 0.51
PRKCA-203ENST00000578063 DRC3Q9H069 523 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 BTBD1Q9H0C5 482 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 OR2AG1Q9H205 316 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 SGK2Q9HBY8 427 aa18.26■□□□□ 0.51
PRKCA-203ENST00000578063 USP36Q9P275 1121 aaKnown RBP18.26■□□□□ 0.51
PRKCA-203ENST00000578063 LRRC72A6NJI9 287 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 SUPT3HB4E1H0 165 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 UBXN8O00124 270 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 ITM2AO43736 263 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 NPHS1O60500 1241 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 SUPT3HO75486 399 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 HSPA4LO95757 839 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 PAK4O96013 591 aaPredicted RBP18.25■□□□□ 0.51
PRKCA-203ENST00000578063 MTHFD2P13995 350 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 GFAPP14136 432 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 OVGP1Q12889 678 aa18.25■□□□□ 0.51
PRKCA-203ENST00000578063 BOP1Q14137 746 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms