RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 PIKFYVEQ9Y2I7 2098 aa18.97■□□□□ 0.63
SS18-208ENST00000577751 TPRP12270 2363 aaKnown RBP18.97■□□□□ 0.63
SS18-208ENST00000577751 C17orf113A0A1B0GUU1 675 aa18.97■□□□□ 0.63
SS18-208ENST00000577751 PDZK1P1A8MUH7 402 aa18.97■□□□□ 0.63
SS18-208ENST00000577751 CCDC188H7C350 402 aa18.97■□□□□ 0.63
SS18-208ENST00000577751 AVILO75366 819 aa18.97■□□□□ 0.63
SS18-208ENST00000577751 RPL10P27635 214 aaKnown RBP18.97■□□□□ 0.63
SS18-208ENST00000577751 CD1CP29017 333 aa18.97■□□□□ 0.63
SS18-208ENST00000577751 SLC19A1P41440 591 aa18.97■□□□□ 0.63
SS18-208ENST00000577751 PAFAH1B1P43034 410 aa18.97■□□□□ 0.63
SS18-208ENST00000577751 PRAMEP78395 509 aa18.97■□□□□ 0.63
SS18-208ENST00000577751 PTK6Q13882 451 aa18.97■□□□□ 0.63
SS18-208ENST00000577751 NFE2L1Q14494 772 aa18.97■□□□□ 0.63
SS18-208ENST00000577751 PPP1R7Q15435 360 aa18.97■□□□□ 0.63
SS18-208ENST00000577751 PACS1Q6VY07 963 aa18.97■□□□□ 0.63
SS18-208ENST00000577751 SH3KBP1Q96B97 665 aa18.97■□□□□ 0.63
SS18-208ENST00000577751 RUNDC3BQ96NL0 473 aa18.97■□□□□ 0.63
SS18-208ENST00000577751 SYNDIG1Q9H7V2 258 aa18.97■□□□□ 0.63
SS18-208ENST00000577751 ATXN7L1Q9ULK2 861 aaPredicted RBP18.97■□□□□ 0.63
SS18-208ENST00000577751 SOX13Q9UN79 622 aa18.97■□□□□ 0.63
SS18-208ENST00000577751 IGHV1OR21-1A0A087WYE8 117 aa18.96■□□□□ 0.63
SS18-208ENST00000577751 CPNE6O95741 557 aa18.96■□□□□ 0.63
SS18-208ENST00000577751 IVDP26440 423 aa18.96■□□□□ 0.63
SS18-208ENST00000577751 NMBRP28336 390 aa18.96■□□□□ 0.63
SS18-208ENST00000577751 NSG1P42857 185 aa18.96■□□□□ 0.63
SS18-208ENST00000577751 MAGEA3P43357 314 aa18.96■□□□□ 0.63
SS18-208ENST00000577751 DRG2P55039 364 aaKnown RBP18.96■□□□□ 0.63
SS18-208ENST00000577751 GPLD1P80108 840 aa18.96■□□□□ 0.63
SS18-208ENST00000577751 ZFP36L1Q07352 338 aaKnown RBP18.96■□□□□ 0.63
SS18-208ENST00000577751 CLCA4Q14CN2 919 aa18.96■□□□□ 0.63
SS18-208ENST00000577751 SEPT7Q16181 437 aaKnown RBP18.96■□□□□ 0.63
SS18-208ENST00000577751 ZNF658BQ4V348 819 aaPredicted RBP18.96■□□□□ 0.63
SS18-208ENST00000577751 RNASEH2BQ5TBB1 312 aaKnown RBP18.96■□□□□ 0.63
SS18-208ENST00000577751 LYPLAL1Q5VWZ2 237 aa18.96■□□□□ 0.63
SS18-208ENST00000577751 CERS6Q6ZMG9 384 aa18.96■□□□□ 0.63
SS18-208ENST00000577751 TMPRSS9Q7Z410 1059 aa18.96■□□□□ 0.63
SS18-208ENST00000577751 B3GNT8Q7Z7M8 397 aa18.96■□□□□ 0.63
SS18-208ENST00000577751 PPIL6Q8IXY8 311 aa18.96■□□□□ 0.63
SS18-208ENST00000577751 CLDN19Q8N6F1 224 aa18.96■□□□□ 0.63
SS18-208ENST00000577751 OR6P1Q8NGX9 317 aa18.96■□□□□ 0.63
SS18-208ENST00000577751 ATXN7L3BQ96GX2 97 aa18.96■□□□□ 0.63
SS18-208ENST00000577751 SERPINB12Q96P63 405 aa18.96■□□□□ 0.63
SS18-208ENST00000577751 SLC38A3Q99624 504 aa18.96■□□□□ 0.63
SS18-208ENST00000577751 STN1Q9H668 368 aaKnown RBP18.96■□□□□ 0.63
SS18-208ENST00000577751 CCDC86Q9H6F5 360 aaKnown RBP18.96■□□□□ 0.63
SS18-208ENST00000577751 UCK1Q9HA47 277 aa18.96■□□□□ 0.63
SS18-208ENST00000577751 XAB2Q9HCS7 855 aaKnown RBP18.96■□□□□ 0.63
SS18-208ENST00000577751 A0A1W2PNU3 283 aaPredicted RBP18.95■□□□□ 0.62
SS18-208ENST00000577751 AP2A2O94973 939 aa18.95■□□□□ 0.62
SS18-208ENST00000577751 CASQ1P31415 396 aa18.95■□□□□ 0.62
SS18-208ENST00000577751 CCKBRP32239 447 aa18.95■□□□□ 0.62
SS18-208ENST00000577751 CYP4F3Q08477 520 aa18.95■□□□□ 0.62
SS18-208ENST00000577751 SEMA3AQ14563 771 aa18.95■□□□□ 0.62
SS18-208ENST00000577751 SYT10Q6XYQ8 523 aa18.95■□□□□ 0.62
SS18-208ENST00000577751 ZNF574Q6ZN55 896 aaPredicted RBP18.95■□□□□ 0.62
SS18-208ENST00000577751 SYDE1Q6ZW31 735 aaPredicted RBP18.95■□□□□ 0.62
SS18-208ENST00000577751 ZNF761Q86XN6 746 aaPredicted RBP18.95■□□□□ 0.62
SS18-208ENST00000577751 SLITRK4Q8IW52 837 aa18.95■□□□□ 0.62
SS18-208ENST00000577751 KLHL7Q8IXQ5 586 aa18.95■□□□□ 0.62
SS18-208ENST00000577751 MPP5Q8N3R9 675 aa18.95■□□□□ 0.62
SS18-208ENST00000577751 MDM1Q8TC05 714 aa18.95■□□□□ 0.62
SS18-208ENST00000577751 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.95■□□□□ 0.62
SS18-208ENST00000577751 NXPE2Q96DL1 559 aa18.95■□□□□ 0.62
SS18-208ENST00000577751 MFSD3Q96ES6 412 aa18.95■□□□□ 0.62
SS18-208ENST00000577751 LIN37Q96GY3 246 aaPredicted RBP18.95■□□□□ 0.62
SS18-208ENST00000577751 TMEM74Q96NL1 305 aa18.95■□□□□ 0.62
SS18-208ENST00000577751 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.95■□□□□ 0.62
SS18-208ENST00000577751 RDH14Q9HBH5 336 aa18.95■□□□□ 0.62
SS18-208ENST00000577751 POT1Q9NUX5 634 aa18.95■□□□□ 0.62
SS18-208ENST00000577751 KCNK4Q9NYG8 393 aa18.95■□□□□ 0.62
SS18-208ENST00000577751 ACSL5Q9ULC5 683 aa18.95■□□□□ 0.62
SS18-208ENST00000577751 KIF26BQ2KJY2 2108 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 MAGEB16A2A368 324 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 OR52A4PA6NMU1 304 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 TMX2-CTNND1H3BSU7 103 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 DNALI1O14645 258 aaPredicted RBP18.94■□□□□ 0.62
SS18-208ENST00000577751 VIPP01282 170 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 ARNTP27540 789 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 PBLDP30039 288 aaPredicted RBP18.94■□□□□ 0.62
SS18-208ENST00000577751 HALP42357 657 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 EPHA4P54764 986 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 INHBCP55103 352 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 CFHR1Q03591 330 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 AMZ1Q400G9 498 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 FASTKD1Q53R41 847 aaKnown RBP18.94■□□□□ 0.62
SS18-208ENST00000577751 NKAIN2Q5VXU1 208 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 USP53Q70EK8 1073 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 PIM3Q86V86 326 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 HM13Q8TCT9 377 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 TTC1Q99614 292 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 NUDT22Q9BRQ3 303 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 CCM2Q9BSQ5 444 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 FOXP3Q9BZS1 431 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 SLC40A1Q9NP59 571 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 ASIC3Q9UHC3 531 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 PRSS21Q9Y6M0 314 aa18.94■□□□□ 0.62
SS18-208ENST00000577751 LILRA5A6NI73 299 aa18.93■□□□□ 0.62
SS18-208ENST00000577751 SDR42E2A6NKP2 422 aa18.93■□□□□ 0.62
SS18-208ENST00000577751 GOLGA8MH3BSY2 632 aa18.93■□□□□ 0.62
SS18-208ENST00000577751 QSOX1O00391 747 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms