RNA–Protein interactions for RNA: ENST00000577565.1

SNRPN-208, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-208ENST00000577565 NIPAL4Q0D2K0 466 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 NCF4Q15080 339 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 QPCTQ16769 361 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 DNTTIP2Q5QJE6 756 aaKnown RBP11.36□□□□□ -0.59
SNRPN-208ENST00000577565 LYPLAL1Q5VWZ2 237 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 ALS2CLQ60I27 953 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 ZNF385CQ66K41 422 aaPredicted RBP11.36□□□□□ -0.59
SNRPN-208ENST00000577565 TMCO3Q6UWJ1 677 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 GDF7Q7Z4P5 450 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 POLNQ7Z5Q5 900 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 LRRTM4Q86VH4 590 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 FJX1Q86VR8 437 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 SYTL1Q8IYJ3 562 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 NDUFAF2Q8N183 169 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 BBS5Q8N3I7 341 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 GALNT16Q8N428 558 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 TTC30BQ8N4P2 665 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 GRHL3Q8TE85 626 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 GLYATL1Q969I3 302 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 CSPG4P5Q96PW8 444 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 TLR10Q9BXR5 811 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 TRIM8Q9BZR9 551 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 TAB2Q9NYJ8 693 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 PKD2L2Q9NZM6 624 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 COPG2Q9UBF2 871 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 DNPEPQ9ULA0 475 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 NOVA2Q9UNW9 492 aaKnown RBP11.36□□□□□ -0.59
SNRPN-208ENST00000577565 DCHS2Q6V1P9 2916 aa11.36□□□□□ -0.59
SNRPN-208ENST00000577565 OR5K3A6NET4 321 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 GPR89AB7ZAQ6 455 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 SNRPB2P08579 225 aaKnown RBP11.35□□□□□ -0.59
SNRPN-208ENST00000577565 GPR89BP0CG08 455 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 OTX2P32243 289 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 ARCN1P48444 511 aaKnown RBP11.35□□□□□ -0.59
SNRPN-208ENST00000577565 ITKQ08881 620 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 RPE65Q16518 533 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 DPYSL2Q16555 572 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 CAMK4Q16566 473 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 TPD52L1Q16890 204 aaPredicted RBP11.35□□□□□ -0.59
SNRPN-208ENST00000577565 SMTNL2Q2TAL5 461 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 ZNF569Q5MCW4 686 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 DCAF10Q5QP82 559 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 TXNRD3NBQ6F5E7 133 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 PLEKHA7Q6IQ23 1121 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 PSTKQ8IV42 348 aaKnown RBP11.35□□□□□ -0.59
SNRPN-208ENST00000577565 ZNF295-AS1Q8N0V1 137 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 MLKLQ8NB16 471 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 OR8K5Q8NH50 307 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 OR1L3Q8NH93 324 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 ITLN2Q8WWU7 325 aaPredicted RBP11.35□□□□□ -0.59
SNRPN-208ENST00000577565 CPT1BQ92523 772 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 MAML1Q92585 1016 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 CD180Q99467 661 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 SPATA16Q9BXB7 569 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 POLR1EQ9GZS1 481 aaKnown RBP11.35□□□□□ -0.59
SNRPN-208ENST00000577565 PCDH9Q9HC56 1237 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 AGPAT4Q9NRZ5 378 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 SEPT11Q9NVA2 429 aaKnown RBP11.35□□□□□ -0.59
SNRPN-208ENST00000577565 TMEM63CQ9P1W3 806 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 BTRCQ9Y297 605 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 NAV3Q8IVL0 2385 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 PCM1Q15154 2024 aa11.35□□□□□ -0.59
SNRPN-208ENST00000577565 UBA6A0AVT1 1052 aaPredicted RBP11.34□□□□□ -0.59
SNRPN-208ENST00000577565 RGSL1A5PLK6 1076 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 TMEM191CA6NGB0 347 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 H3BRJ5 948 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 PRPSAP2O60256 369 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 DIAPH2O60879 1101 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 ZBTB11O95625 1053 aaPredicted RBP11.34□□□□□ -0.59
SNRPN-208ENST00000577565 MMP2P08253 660 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 IDSP22304 550 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 PTGER4P35408 488 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 ARL4DP49703 201 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 KPNA2P52292 529 aaKnown RBP11.34□□□□□ -0.59
SNRPN-208ENST00000577565 ZNF135P52742 658 aaPredicted RBP11.34□□□□□ -0.59
SNRPN-208ENST00000577565 KRTAP10-9P60411 292 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 RPL26P61254 145 aaKnown RBP11.34□□□□□ -0.59
SNRPN-208ENST00000577565 ART3Q13508 389 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 HIF1AQ16665 826 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 DPCR1Q3MIW9 517 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 ANKRD20A8PQ5CZ79 823 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 TCP11X2Q5H9J9 407 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 FAM182AQ5T1J6 154 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 ACAD10Q6JQN1 1059 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 DUS1LQ6P1R4 473 aaKnown RBP11.34□□□□□ -0.59
SNRPN-208ENST00000577565 FAM83HQ6ZRV2 1179 aaPredicted RBP11.34□□□□□ -0.59
SNRPN-208ENST00000577565 ZADH2Q8N4Q0 377 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 LRRN4Q8WUT4 740 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 CLIP3Q96DZ5 547 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 AGPAT1Q99943 283 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 SLX1AQ9BQ83 275 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 SYT11Q9BT88 431 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 NUP85Q9BW27 656 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 ZWILCHQ9H900 591 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 PSMD13Q9UNM6 376 aa11.34□□□□□ -0.59
SNRPN-208ENST00000577565 RPL26L1Q9UNX3 145 aaKnown RBP11.34□□□□□ -0.59
SNRPN-208ENST00000577565 TACC2O95359 2948 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 CCDC88CQ9P219 2028 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 MFSD11O43934 449 aa11.33□□□□□ -0.6
SNRPN-208ENST00000577565 CNOT3O75175 753 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms