RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 UTP11Q9Y3A2 253 aaKnown RBP13.04□□□□□ -0.32
RPAIN-216ENST00000575599 KIR2DS5A0A0G2JLQ3 304 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 A0A0G2JNG1 304 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 OR51F1A6NGY5 319 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 CFAP99D6REC4 459 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 H7C0S8 307 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 KIR2DS3K7RE56 304 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 B4GAT1O43505 415 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 BRINP1O60477 761 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 POP7O75817 140 aaKnown RBP13.03□□□□□ -0.32
RPAIN-216ENST00000575599 CAPNS1P04632 268 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 RALBP11234 206 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 IDSP22304 550 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 FASLGP48023 281 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 ARSDP51689 593 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 INHBCP55103 352 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 CACNG1Q06432 222 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 KIR2DS5Q14953 304 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 NR1D2Q14995 579 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 RTP5Q14D33 572 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 SKIDA1Q1XH10 827 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 NKAIN2Q5VXU1 208 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 USP53Q70EK8 1073 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 SERPINA9Q86WD7 417 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 PROSER1Q86XN7 944 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 TRIM48Q8IWZ4 208 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 PPHLN1Q8NEY8 458 aaKnown RBP13.03□□□□□ -0.32
RPAIN-216ENST00000575599 COPS8Q99627 209 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 NUDT22Q9BRQ3 303 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 LRRC1Q9BTT6 524 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 RAB17Q9H0T7 212 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 SARS2Q9NP81 518 aaKnown RBP13.03□□□□□ -0.32
RPAIN-216ENST00000575599 SCHIP1Q9P0W5 487 aaPredicted RBP13.03□□□□□ -0.32
RPAIN-216ENST00000575599 CPNE7Q9UBL6 633 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 SLC2A6Q9UGQ3 507 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 PCYOX1Q9UHG3 505 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 BPTFQ12830 3046 aa13.03□□□□□ -0.32
RPAIN-216ENST00000575599 FREM2Q5SZK8 3169 aa13.02□□□□□ -0.32
RPAIN-216ENST00000575599 IGF2RP11717 2491 aa13.02□□□□□ -0.32
RPAIN-216ENST00000575599 TCRBV7S3A2A0A539 114 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 CCDC162PA2VCL2 907 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 OR5K4A6NMS3 321 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 AGAP14A8MT82 685 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 TTI1O43156 1089 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 RAD51CO43502 376 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 CPNE6O95741 557 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 ADRA1DP25100 572 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 ACRV1P26436 265 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 MAPK9P45984 424 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 GPR3P46089 330 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 CRADDP78560 199 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 LAMB3Q13751 1172 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 NFE2L1Q14494 772 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 GPR33Q49SQ1 333 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.02□□□□□ -0.33
RPAIN-216ENST00000575599 PHF19Q5T6S3 580 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 TSTD2Q5T7W7 516 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 FAM83HQ6ZRV2 1179 aaPredicted RBP13.02□□□□□ -0.33
RPAIN-216ENST00000575599 TMPRSS9Q7Z410 1059 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 LRRN4CLQ8ND94 238 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 MYRIPQ8NFW9 859 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 OR13J1Q8NGT2 312 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 GRAMD1AQ96CP6 724 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 AHCYL2Q96HN2 611 aaKnown RBP13.02□□□□□ -0.33
RPAIN-216ENST00000575599 ZNF514Q96K75 400 aaPredicted RBP13.02□□□□□ -0.33
RPAIN-216ENST00000575599 ZNF778Q96MU6 729 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 TMEM74Q96NL1 305 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 RANBP9Q96S59 729 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 STRADBQ9C0K7 418 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 POLR1BQ9H9Y6 1135 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 ZDHHC3Q9NYG2 299 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.02□□□□□ -0.33
RPAIN-216ENST00000575599 ASIC3Q9UHC3 531 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 PSMD13Q9UNM6 376 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 RAXQ9Y2V3 346 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 TCAF1Q9Y4C2 921 aa13.02□□□□□ -0.33
RPAIN-216ENST00000575599 V9GYY5 206 aaPredicted RBP13.02□□□□□ -0.33
RPAIN-216ENST00000575599 UNC13CQ8NB66 2214 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 IGHV1OR21-1A0A087WYE8 117 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 CCDC187A0A096LP49 1063 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 A0A1W2PNU3 283 aaPredicted RBP13.01□□□□□ -0.33
RPAIN-216ENST00000575599 PMS2P1A4D2B8 440 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 PRR19A6NJB7 356 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 OR52A4PA6NMU1 304 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 TAF4O00268 1085 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 GOT2P00505 430 aaKnown RBP13.01□□□□□ -0.33
RPAIN-216ENST00000575599 VIPP01282 170 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 ATP1B2P14415 290 aaPredicted RBP13.01□□□□□ -0.33
RPAIN-216ENST00000575599 BRAFP15056 766 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 TPSB2P20231 275 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 CD1CP29017 333 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 HALP42357 657 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 UBE2IP63279 158 aaKnown RBP13.01□□□□□ -0.33
RPAIN-216ENST00000575599 PRAMEP78395 509 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 MRPS25P82663 173 aaKnown RBP13.01□□□□□ -0.33
RPAIN-216ENST00000575599 DMPKQ09013 629 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 TPSAB1Q15661 275 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 BCL7AQ4VC05 210 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 PIM3Q86V86 326 aa13.01□□□□□ -0.33
RPAIN-216ENST00000575599 JAMLQ86YT9 394 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms