RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 OR2L2Q8NH16 312 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 PATE1Q8WXA2 126 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 SH3KBP1Q96B97 665 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 STAMBPL1Q96FJ0 436 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 SIGLEC10Q96LC7 697 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 ERP44Q9BS26 406 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 CCM2Q9BSQ5 444 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 SCNM1Q9BWG6 230 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 ANGPTL2Q9UKU9 493 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 SNX24Q9Y343 169 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 RPS6KL1Q9Y6S9 549 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 RNF215Q9Y6U7 377 aa14.95□□□□□ -0.02
LITAF-217ENST00000575426 NDUFS3O75489 264 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 USP1O94782 785 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 SEC31AO94979 1220 aaKnown RBP14.94□□□□□ -0.02
LITAF-217ENST00000575426 FTH1P02794 183 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 GSTM1P09488 218 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 RPL10P27635 214 aaKnown RBP14.94□□□□□ -0.02
LITAF-217ENST00000575426 MAGEA3P43357 314 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 MRPS25P82663 173 aaKnown RBP14.94□□□□□ -0.02
LITAF-217ENST00000575426 INSM1Q01101 510 aaPredicted RBP14.94□□□□□ -0.02
LITAF-217ENST00000575426 GSTM4Q03013 218 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 DHX9Q08211 1270 aaKnown RBP14.94□□□□□ -0.02
LITAF-217ENST00000575426 DMPKQ09013 629 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 THOC5Q13769 683 aaKnown RBP14.94□□□□□ -0.02
LITAF-217ENST00000575426 SMAD1Q15797 465 aaKnown RBP14.94□□□□□ -0.02
LITAF-217ENST00000575426 HES3Q5TGS1 186 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 WASH2PQ6VEQ5 465 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 MICALCLQ6ZW33 695 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 TMPRSS7Q7RTY8 843 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 CFAP206Q8IYR0 622 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 SFRP1Q8N474 314 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 Q8N9G6 341 aaPredicted RBP14.94□□□□□ -0.02
LITAF-217ENST00000575426 GABPB2Q8TAK5 448 aaPredicted RBP14.94□□□□□ -0.02
LITAF-217ENST00000575426 SLC37A2Q8TED4 501 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 LINC00615Q96LM1 132 aaPredicted RBP14.94□□□□□ -0.02
LITAF-217ENST00000575426 NAT9Q9BTE0 207 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 TSSK1BQ9BXA7 367 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 DPH5Q9H2P9 285 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 WASH6PQ9NQA3 447 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 FAM8A1Q9UBU6 413 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 ACSL5Q9ULC5 683 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 CLCA2Q9UQC9 943 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 KNTC1P50748 2209 aa14.94□□□□□ -0.02
LITAF-217ENST00000575426 C17orf113A0A1B0GUU1 675 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 TTC4O95801 387 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 EML2O95834 649 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 TOP3BO95985 862 aaKnown RBP14.93□□□□□ -0.02
LITAF-217ENST00000575426 MT-CO3P00414 261 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 VIPP01282 170 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 ALDH4A1P30038 563 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 GPR3P46089 330 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 RPL21P46778 160 aaKnown RBP14.93□□□□□ -0.02
LITAF-217ENST00000575426 FASLGP48023 281 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 DRG2P55039 364 aaKnown RBP14.93□□□□□ -0.02
LITAF-217ENST00000575426 CCL7P80098 99 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 HHEXQ03014 270 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 SPIDRQ14159 915 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 NFE2L1Q14494 772 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 HIF1AQ16665 826 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 AGAP9Q5VTM2 703 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 METRNLQ641Q3 311 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 C8orf74Q6P047 294 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 ABRAXAS1Q6UWZ7 409 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 TMEM135Q86UB9 458 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 CCNJLQ8IV13 435 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 CLDN19Q8N6F1 224 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 HM13Q8TCT9 377 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 NAT14Q8WUY8 206 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 CXorf40BQ96DE9 158 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 GFM1Q96RP9 751 aaKnown RBP14.93□□□□□ -0.02
LITAF-217ENST00000575426 SLC38A3Q99624 504 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.93□□□□□ -0.02
LITAF-217ENST00000575426 LRRN3Q9H3W5 708 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 SARS2Q9NP81 518 aaKnown RBP14.93□□□□□ -0.02
LITAF-217ENST00000575426 WHRNQ9P202 907 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 NEUROG3Q9Y4Z2 214 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 MRFAP1Q9Y605 127 aa14.93□□□□□ -0.02
LITAF-217ENST00000575426 CTAGE15A4D2H0 777 aa14.92□□□□□ -0.02
LITAF-217ENST00000575426 A6NCN8 305 aa14.92□□□□□ -0.02
LITAF-217ENST00000575426 PPM1DO15297 605 aa14.92□□□□□ -0.02
LITAF-217ENST00000575426 SGTAO43765 313 aa14.92□□□□□ -0.02
LITAF-217ENST00000575426 RPLP0P05388 317 aaKnown RBP14.92□□□□□ -0.02
LITAF-217ENST00000575426 CTAGE8P0CG41 777 aa14.92□□□□□ -0.02
LITAF-217ENST00000575426 PGAM1P18669 254 aa14.92□□□□□ -0.02
LITAF-217ENST00000575426 XRCC1P18887 633 aaPredicted RBP14.92□□□□□ -0.02
LITAF-217ENST00000575426 SPINK2P20155 84 aa14.92□□□□□ -0.02
LITAF-217ENST00000575426 SEMA3AQ14563 771 aa14.92□□□□□ -0.02
LITAF-217ENST00000575426 LONRF1Q17RB8 773 aa14.92□□□□□ -0.02
LITAF-217ENST00000575426 RNF187Q5TA31 235 aaPredicted RBP14.92□□□□□ -0.02
LITAF-217ENST00000575426 NEPROQ6NW34 567 aa14.92□□□□□ -0.02
LITAF-217ENST00000575426 RBM44Q6ZP01 1051 aaKnown RBP14.92□□□□□ -0.02
LITAF-217ENST00000575426 LDB1Q86U70 411 aaPredicted RBP14.92□□□□□ -0.02
LITAF-217ENST00000575426 CTAGE6Q86UF2 777 aa14.92□□□□□ -0.02
LITAF-217ENST00000575426 LRRC6Q86X45 466 aa14.92□□□□□ -0.02
LITAF-217ENST00000575426 CTAGE4Q8IX94 777 aa14.92□□□□□ -0.02
LITAF-217ENST00000575426 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.92□□□□□ -0.02
LITAF-217ENST00000575426 CALML6Q8TD86 181 aa14.92□□□□□ -0.02
LITAF-217ENST00000575426 LRRC39Q96DD0 335 aa14.92□□□□□ -0.02
LITAF-217ENST00000575426 CCDC97Q96F63 343 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms