RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 KIR2DS3K7RE56 304 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 ZSCAN12O43309 604 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 CPNE6O95741 557 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 C9P02748 559 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 APRTP07741 180 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 HGFP14210 728 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 XRCC1P18887 633 aaPredicted RBP8.51□□□□□ -1.05
SMG6-216ENST00000575176 MSNP26038 577 aaKnown RBP8.51□□□□□ -1.05
SMG6-216ENST00000575176 RPL10P27635 214 aaKnown RBP8.51□□□□□ -1.05
SMG6-216ENST00000575176 EIF2S3P41091 472 aaKnown RBP8.51□□□□□ -1.05
SMG6-216ENST00000575176 ARCN1P48444 511 aaKnown RBP8.51□□□□□ -1.05
SMG6-216ENST00000575176 FNTAP49354 379 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 LIMK2P53671 638 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 DRG2P55039 364 aaKnown RBP8.51□□□□□ -1.05
SMG6-216ENST00000575176 GFERP55789 205 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 GABREP78334 506 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 PDE1BQ01064 536 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 HHEXQ03014 270 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 KIR2DS5Q14953 304 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 INSCQ1MX18 579 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 GPR33Q49SQ1 333 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 C3orf38Q5JPI3 329 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 METRNLQ641Q3 311 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 CAPRIN2Q6IMN6 1127 aaKnown RBP8.51□□□□□ -1.05
SMG6-216ENST00000575176 CCDC70Q6NSX1 233 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 DET1Q7L5Y6 550 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 LINC00523Q86TU6 105 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 TRAPPC5Q8IUR0 188 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 SPNS2Q8IVW8 549 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 CLDN19Q8N6F1 224 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 NAT8LQ8N9F0 302 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 Q8N9G6 341 aaPredicted RBP8.51□□□□□ -1.05
SMG6-216ENST00000575176 SPDYE1Q8NFV5 336 aaPredicted RBP8.51□□□□□ -1.05
SMG6-216ENST00000575176 OR2L2Q8NH16 312 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 RSC1A1Q92681 617 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 PEX13Q92968 403 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 SLC46A1Q96NT5 459 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 GFM1Q96RP9 751 aaKnown RBP8.51□□□□□ -1.05
SMG6-216ENST00000575176 FERMT1Q9BQL6 677 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 KIFC1Q9BW19 673 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 TBC1D10AQ9BXI6 508 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 OR52A5Q9H2C5 316 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 SLC40A1Q9NP59 571 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 EVA1BQ9NVM1 165 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 ZDHHC3Q9NYG2 299 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.51□□□□□ -1.05
SMG6-216ENST00000575176 ACSL6Q9UKU0 697 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 CDYLQ9Y232 598 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 DNAJC16Q9Y2G8 782 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 PIEZO2Q9H5I5 2752 aa8.51□□□□□ -1.05
SMG6-216ENST00000575176 TLN1Q9Y490 2541 aaKnown RBP8.51□□□□□ -1.05
SMG6-216ENST00000575176 TRBV23OR9-2A0A075B6M9 112 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 CCDC187A0A096LP49 1063 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 HEATR9A2RTY3 570 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 MGAT4DA6NG13 374 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 C9orf172C9J069 976 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 PSMD3O43242 534 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 OR1I1O60431 355 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 AVILO75366 819 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 POP7O75817 140 aaKnown RBP8.5□□□□□ -1.05
SMG6-216ENST00000575176 GOT2P00505 430 aaKnown RBP8.5□□□□□ -1.05
SMG6-216ENST00000575176 ITGA2BP08514 1039 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 TPBGLP0DKB5 382 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 ITIH1P19827 911 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 ITGALP20701 1170 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 ADRA1DP25100 572 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 NMBRP28336 390 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 HADHAP40939 763 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 CAPZBP47756 277 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 EPHA4P54764 986 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 INHBCP55103 352 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 CACNG1Q06432 222 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 SEPT6Q14141 434 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 GPR18Q14330 331 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 GSE1Q14687 1217 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 TRIP13Q15645 432 aaPredicted RBP8.5□□□□□ -1.05
SMG6-216ENST00000575176 SEPT7Q16181 437 aaKnown RBP8.5□□□□□ -1.05
SMG6-216ENST00000575176 RPE65Q16518 533 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 CLPPQ16740 277 aaPredicted RBP8.5□□□□□ -1.05
SMG6-216ENST00000575176 FNBP1LQ5T0N5 605 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 RNASEH2BQ5TBB1 312 aaKnown RBP8.5□□□□□ -1.05
SMG6-216ENST00000575176 LRRC8BQ6P9F7 803 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 CCDC137Q6PK04 289 aaKnown RBP8.5□□□□□ -1.05
SMG6-216ENST00000575176 TMEM220Q6QAJ8 160 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 TMEM26Q6ZUK4 368 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 ARHGAP22Q7Z5H3 698 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 CCDC89Q8N998 374 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 RCBTB1Q8NDN9 531 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 OR4D9Q8NGE8 314 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 HM13Q8TCT9 377 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 MAIP1Q8WWC4 291 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 ULK4Q96C45 1275 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 GRAMD1AQ96CP6 724 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 MFSD3Q96ES6 412 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 CCDC74BQ96LY2 380 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 SERPINB12Q96P63 405 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 INSM2Q96T92 566 aaPredicted RBP8.5□□□□□ -1.05
SMG6-216ENST00000575176 MENTQ9BUN1 341 aa8.5□□□□□ -1.05
SMG6-216ENST00000575176 ZCCHC2Q9C0B9 1178 aaKnown RBP8.5□□□□□ -1.05
SMG6-216ENST00000575176 DDX47Q9H0S4 455 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms