RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	OTOA	Q7RTW8	1153 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	CLEC14A	Q86T13	490 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	TBC1D1	Q86TI0	1168 aa	Predicted RBP	11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	TRIM74	Q86UV6	250 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	LRRTM4	Q86VH4	590 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	KRT222	Q8N1A0	295 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	C4orf33	Q8N1A6	199 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	ARFGAP2	Q8N6H7	521 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	OR56A4	Q8NGH8	313 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	C1orf216	Q8TAB5	229 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	CD200R1	Q8TD46	325 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	ASZ1	Q8WWH4	475 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	SNX19	Q92543	992 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	KLHDC7B	Q96G42	594 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	APOPT1	Q96IL0	206 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	HSPA12B	Q96MM6	686 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	TSNARE1	Q96NA8	513 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	MYOC	Q99972	504 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	VPS11	Q9H270	941 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	GPR27	Q9NS67	375 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	PCMTD2	Q9NV79	361 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	ZSCAN32	Q9NX65	697 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	GALP	Q9UBC7	116 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	EIF2B4	Q9UI10	523 aa	Known RBP	11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	TMEM98	Q9Y2Y6	226 aa		11.72	□□□□□ -0.53
PRPF8-212	ENST00000575116	TRIO	O75962	3097 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	BPTF	Q12830	3046 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	CEP192	Q8TEP8	1941 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	MGAT4D	A6NG13	374 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	TMEM202	A6NGA9	273 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	PRR33	A8MZF0	331 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116		H0Y8X5	98 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	GOLGA8R	I6L899	631 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	LIN7A	O14910	233 aa	Predicted RBP	11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	TM9SF1	O15321	606 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	GPR37L1	O60883	481 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	GPC4	O75487	556 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	POP7	O75817	140 aa	Known RBP	11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	KLHL2	O95198	593 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	ZWINT	O95229	277 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	APOA4	P06727	396 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	CCDC166	P0CW27	439 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	ENO3	P13929	434 aa	Predicted RBP	11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	CREB1	P16220	341 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	CD38	P28907	300 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	CCR7	P32248	378 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	RGS4	P49798	205 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	KPNA2	P52292	529 aa	Known RBP	11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	THOP1	P52888	689 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	ATP6V0D1	P61421	351 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	PPP2R2A	P63151	447 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	GBX1	Q14549	363 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	ZNF658B	Q4V348	819 aa	Predicted RBP	11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	AGAP9	Q5VTM2	703 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	PMS2CL	Q68D20	193 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	PAQR3	Q6TCH7	311 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	TMEM207	Q6UWW9	146 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	PIM3	Q86V86	326 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	TRAPPC5	Q8IUR0	188 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	ZNF547	Q8IVP9	402 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	TMEFF1	Q8IYR6	380 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	ZBTB2	Q8N680	514 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	DEFB119	Q8N690	84 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	SIDT2	Q8NBJ9	832 aa	Known RBP	11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	ZBTB44	Q8NCP5	570 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	OR13H1	Q8NG92	308 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	OR2L2	Q8NH16	312 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	SKA1	Q96BD8	255 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	ZC3H10	Q96K80	434 aa	Known RBP	11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	C1QTNF1	Q9BXJ1	281 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	SLC13A1	Q9BZW2	595 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	DERL2	Q9GZP9	239 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	IQCG	Q9H095	443 aa	Known RBP	11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	CNOT10	Q9H9A5	744 aa	Known RBP	11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	NMRAL1	Q9HBL8	299 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	SARS2	Q9NP81	518 aa	Known RBP	11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	KCNK9	Q9NPC2	374 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	AASDHPPT	Q9NRN7	309 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	RUVBL2	Q9Y230	463 aa	Known RBP	11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	CA5B	Q9Y2D0	317 aa		11.71	□□□□□ -0.53
PRPF8-212	ENST00000575116	CACNA1I	Q9P0X4	2223 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	SPTY2D1-AS1	A0A0U1RR47	76 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116		A0A1W2PR77	199 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	SLC5A10	A0PJK1	596 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	PRSS38	A1L453	326 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	PRR5-ARHGAP8	B1AHC4	643 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	HR	O43593	1189 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	SLCO2B1	O94956	709 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	RBP1	P09455	135 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	SP9	P0CG40	484 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	THEGL	P0DJG4	465 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	VCL	P18206	1134 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	NR1D1	P20393	614 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	ARHGAP8	P85298	464 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	RPA4	Q13156	261 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	ZNF460	Q14592	562 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	ACAP2	Q15057	778 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	ANGPT1	Q15389	498 aa		11.7	□□□□□ -0.54
PRPF8-212	ENST00000575116	CCDC153	Q494R4	210 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms