RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 FTH1P02794 183 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 PBLDP30039 288 aaPredicted RBP23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 NUDT1P36639 197 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 PFN3P60673 137 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 CSHL1Q14406 222 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 BCL7AQ4VC05 210 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 OTOAQ7RTW8 1153 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 WDR5BQ86VZ2 330 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 ZNF547Q8IVP9 402 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 TMEFF1Q8IYR6 380 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 ZBTB2Q8N680 514 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 MGARPQ8TDB4 240 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 NXNL1Q96CM4 212 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 UBXN10Q96LJ8 280 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 HSPA12BQ96MM6 686 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 TSSK1BQ9BXA7 367 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 MLXIPLQ9NP71 852 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 IGSF5Q9NSI5 407 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 FAM8A1Q9UBU6 413 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 DCDC2Q9UHG0 476 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 TSR3Q9UJK0 312 aaKnown RBP23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 HS3ST3A1Q9Y663 406 aa23.67■■□□□ 1.38
ATPAF1-213ENST00000574428 QSOX1O00391 747 aa23.66■■□□□ 1.38
ATPAF1-213ENST00000574428 MAGEC1O60732 1142 aa23.66■■□□□ 1.38
ATPAF1-213ENST00000574428 LILRB5O75023 590 aa23.66■■□□□ 1.38
ATPAF1-213ENST00000574428 TPRG1LQ5T0D9 272 aa23.66■■□□□ 1.38
ATPAF1-213ENST00000574428 C16orf46Q6P387 395 aa23.66■■□□□ 1.38
ATPAF1-213ENST00000574428 ARFGAP2Q8N6H7 521 aa23.66■■□□□ 1.38
ATPAF1-213ENST00000574428 INPP5DQ92835 1189 aa23.66■■□□□ 1.38
ATPAF1-213ENST00000574428 SLC6A18Q96N87 628 aa23.66■■□□□ 1.38
ATPAF1-213ENST00000574428 RUVBL2Q9Y230 463 aaKnown RBP23.66■■□□□ 1.38
ATPAF1-213ENST00000574428 MEI4A8MW99 385 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 F8W8V4 182 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 NUAK1O60285 661 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 KLHL2O95198 593 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 AOAHP28039 575 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 GLRBP48167 497 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 KIAA1024LP59773 190 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 BOP1Q14137 746 aaKnown RBP23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 PLA2G4EQ3MJ16 856 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 N4BP2L1Q5TBK1 243 aaPredicted RBP23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 KYAT3Q6YP21 454 aaKnown RBP23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 CCDC91Q7Z6B0 441 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 LONP2Q86WA8 852 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 ELMO1Q92556 727 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 ZNF514Q96K75 400 aaPredicted RBP23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 TSNARE1Q96NA8 513 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 CCM2Q9BSQ5 444 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 SYTL2Q9HCH5 934 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 TMEM216Q9P0N5 145 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 EIF2B4Q9UI10 523 aaKnown RBP23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 EMCNQ9ULC0 261 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 PLLPQ9Y342 182 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 A6NNZ2 444 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 CHUKO15111 745 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 CEACAM5P06731 702 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 GSTA1P08263 222 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 HOXC4P09017 264 aaPredicted RBP23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 LTA4HP09960 611 aaKnown RBP23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 COL6A2P12110 1019 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 CD27P26842 260 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 MAOBP27338 520 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 SRSF5Q13243 272 aaKnown RBP23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 NFATC4Q14934 902 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 TTC19Q6DKK2 380 aaPredicted RBP23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 Q6ZSR6 202 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 BMP8AQ7Z5Y6 402 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 ABI3BPQ7Z7G0 1075 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 OR13H1Q8NG92 308 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 EEF1AKMT1Q8WVE0 214 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 LINGO1Q96FE5 620 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 GPR78Q96P69 363 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 FAM111AQ96PZ2 611 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 NKIRAS1Q9NYS0 192 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 SLC17A4Q9Y2C5 497 aa23.65■■□□□ 1.38
ATPAF1-213ENST00000574428 TSPAN12O95859 305 aa23.64■■□□□ 1.37
ATPAF1-213ENST00000574428 FUCA1P04066 466 aa23.64■■□□□ 1.37
ATPAF1-213ENST00000574428 SLC26A3P40879 764 aa23.64■■□□□ 1.37
ATPAF1-213ENST00000574428 IL2P60568 153 aa23.64■■□□□ 1.37
ATPAF1-213ENST00000574428 GNGT1P63211 74 aa23.64■■□□□ 1.37
ATPAF1-213ENST00000574428 ACSBG2Q5FVE4 666 aa23.64■■□□□ 1.37
ATPAF1-213ENST00000574428 ARMCX6Q7L4S7 300 aa23.64■■□□□ 1.37
ATPAF1-213ENST00000574428 FGF22Q9HCT0 170 aa23.64■■□□□ 1.37
ATPAF1-213ENST00000574428 MRPL40Q9NQ50 206 aaKnown RBP23.64■■□□□ 1.37
ATPAF1-213ENST00000574428 LATS2Q9NRM7 1088 aa23.64■■□□□ 1.37
ATPAF1-213ENST00000574428 AASDHPPTQ9NRN7 309 aa23.64■■□□□ 1.37
ATPAF1-213ENST00000574428 GRID1Q9ULK0 1009 aa23.64■■□□□ 1.37
ATPAF1-213ENST00000574428 GPR34Q9UPC5 381 aa23.64■■□□□ 1.37
ATPAF1-213ENST00000574428 ZWINTO95229 277 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 CHN1P15882 459 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 IRX4P78413 519 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 HSPA14Q0VDF9 509 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 INSCQ1MX18 579 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 FAM83EQ2M2I3 478 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 ZNF771Q7L3S4 317 aaPredicted RBP23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 LRRTM4Q86VH4 590 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 NKAPQ8N5F7 415 aaKnown RBP23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 DENND1AQ8TEH3 1009 aa23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 CNOT10Q9H9A5 744 aaKnown RBP23.63■■□□□ 1.37
ATPAF1-213ENST00000574428 TM7SF3Q9NS93 570 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms