RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 SPATS2LQ9NUQ6 558 aaKnown RBP10.86□□□□□ -0.67
CHD3-216ENST00000573936 SIRPGQ9P1W8 387 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 WHRNQ9P202 907 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 KCNK6Q9Y257 313 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 PLEKHM1Q9Y4G2 1056 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 MAD1L1Q9Y6D9 718 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 PTPRBP23467 1997 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 PLXNB3Q9ULL4 1909 aa10.86□□□□□ -0.67
CHD3-216ENST00000573936 C17orf113A0A1B0GUU1 675 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 CPED1A4D0V7 1026 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 CTAGE15A4D2H0 777 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 MGAT4DA6NG13 374 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 OR51F1A6NGY5 319 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 OR2AG2A6NM03 316 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 CD3EAPO15446 510 aaKnown RBP10.85□□□□□ -0.67
CHD3-216ENST00000573936 NOBOXO60393 691 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 POP7O75817 140 aaKnown RBP10.85□□□□□ -0.67
CHD3-216ENST00000573936 DKK1O94907 266 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 TTC4O95801 387 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 POLBP06746 335 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 CTAGE8P0CG41 777 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 PNLIPP16233 465 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 GLB1P16278 677 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 IDSP22304 550 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 RPL21P46778 160 aaKnown RBP10.85□□□□□ -0.67
CHD3-216ENST00000573936 TTPAP49638 278 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 CDKN1CP49918 316 aaPredicted RBP10.85□□□□□ -0.67
CHD3-216ENST00000573936 CAV1Q03135 178 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 DMPKQ09013 629 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 BIRC2Q13490 618 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 DBN1Q16643 649 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 PLA2G4EQ3MJ16 856 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 ANKRD20A4Q4UJ75 823 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 C14orf28Q4W4Y0 310 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 FNBP1LQ5T0N5 605 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 C8orf74Q6P047 294 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 ZNF449Q6P9G9 518 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 DET1Q7L5Y6 550 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 TMEM135Q86UB9 458 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 SLC9B2Q86UD5 537 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 CTAGE6Q86UF2 777 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 ZNF547Q8IVP9 402 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 CTAGE4Q8IX94 777 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 LMNTD2Q8IXW0 634 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 PIANPQ8IYJ0 282 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 KYQ8NBH2 561 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 WDR48Q8TAF3 677 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 MAPK15Q8TD08 544 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 MFSD3Q96ES6 412 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 SGF29Q96ES7 293 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 STAMBPL1Q96FJ0 436 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 CARD6Q9BX69 1037 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 OSGEPL1Q9H4B0 414 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 STN1Q9H668 368 aaKnown RBP10.85□□□□□ -0.67
CHD3-216ENST00000573936 TOR4AQ9NXH8 423 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 RAXQ9Y2V3 346 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 SNX24Q9Y343 169 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 PCYT1BQ9Y5K3 369 aaPredicted RBP10.85□□□□□ -0.67
CHD3-216ENST00000573936 ST14Q9Y5Y6 855 aa10.85□□□□□ -0.67
CHD3-216ENST00000573936 LRP4O75096 1905 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 LY6G6EA0A0G2JKS1 128 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 KIR2DS5A0A0G2JLQ3 304 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 A0A0G2JNG1 304 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 RHPN2P1A8MT19 583 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 KIR2DS3K7RE56 304 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 NUDT21O43809 227 aaKnown RBP10.84□□□□□ -0.67
CHD3-216ENST00000573936 SNX2O60749 519 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 NDUFS3O75489 264 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 VAPBO95292 243 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 FTH1P02794 183 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 OR56A5P0C7T3 313 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 PGAM1P18669 254 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 HALP42357 657 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 PRLHRP49683 370 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 CTSCP53634 463 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 DRG2P55039 364 aaKnown RBP10.84□□□□□ -0.67
CHD3-216ENST00000573936 B4GALNT1Q00973 533 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 DHX9Q08211 1270 aaKnown RBP10.84□□□□□ -0.67
CHD3-216ENST00000573936 THOC5Q13769 683 aaKnown RBP10.84□□□□□ -0.67
CHD3-216ENST00000573936 HLTFQ14527 1009 aaKnown RBP eCLIP10.84□□□□□ -0.67
CHD3-216ENST00000573936 KIR2DS5Q14953 304 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 HIF1AQ16665 826 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 BBS9Q3SYG4 887 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 GLE1Q53GS7 698 aaKnown RBP10.84□□□□□ -0.67
CHD3-216ENST00000573936 RNF187Q5TA31 235 aaPredicted RBP10.84□□□□□ -0.67
CHD3-216ENST00000573936 AGAP9Q5VTM2 703 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 DUPD1Q68J44 220 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 GUSBP11Q6P575 273 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 IYDQ6PHW0 289 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 CES3Q6UWW8 571 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 WASH2PQ6VEQ5 465 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 EFL1Q7Z2Z2 1120 aaKnown RBP10.84□□□□□ -0.67
CHD3-216ENST00000573936 C11orf96Q7Z7L8 435 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 C17orf82Q86X59 251 aaPredicted RBP10.84□□□□□ -0.67
CHD3-216ENST00000573936 MARCH9Q86YJ5 346 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 NAGSQ8N159 534 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 GALNT15Q8N3T1 639 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 MMGT1Q8N4V1 131 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 OTUD6BQ8N6M0 293 aa10.84□□□□□ -0.67
CHD3-216ENST00000573936 BEND7Q8N7W2 519 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms