RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 MRNIPQ6NTE8 343 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 TMEM220Q6QAJ8 160 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 CRTC3Q6UUV7 619 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 SDCCAG8Q86SQ7 713 aaPredicted RBP13.33□□□□□ -0.28
RPAIN-213ENST00000573577 TMEM135Q86UB9 458 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 SFTPA2Q8IWL1 248 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 OTUD6BQ8N6M0 293 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 GABPB2Q8TAK5 448 aaPredicted RBP13.33□□□□□ -0.28
RPAIN-213ENST00000573577 ZDHHC1Q8WTX9 485 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 ZCCHC14Q8WYQ9 949 aaKnown RBP13.33□□□□□ -0.28
RPAIN-213ENST00000573577 CCDC74AQ96AQ1 378 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 ZNF669Q96BR6 464 aaPredicted RBP13.33□□□□□ -0.28
RPAIN-213ENST00000573577 SIGLEC10Q96LC7 697 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 CCDC3Q9BQI4 270 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 TIMM29Q9BSF4 260 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 VPS37BQ9H9H4 285 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 PRKAB1Q9Y478 270 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 PCYT1BQ9Y5K3 369 aaPredicted RBP13.33□□□□□ -0.28
RPAIN-213ENST00000573577 FREM2Q5SZK8 3169 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 IGF2RP11717 2491 aa13.33□□□□□ -0.28
RPAIN-213ENST00000573577 IGLV3-16A0A075B6K0 115 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 TRABD2BA6NFA1 517 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 OR2AG2A6NM03 316 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 CD3EAPO15446 510 aaKnown RBP13.32□□□□□ -0.28
RPAIN-213ENST00000573577 AP2A2O94973 939 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 VAPBO95292 243 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 CAPNS1P04632 268 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 ACP5P13686 325 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 SLC2A4P14672 509 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 ZNF7P17097 686 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-213ENST00000573577 TTPAP49638 278 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 CDKN1CP49918 316 aaPredicted RBP13.32□□□□□ -0.28
RPAIN-213ENST00000573577 CLCNKAP51800 687 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 DHX9Q08211 1270 aaKnown RBP13.32□□□□□ -0.28
RPAIN-213ENST00000573577 DBN1Q16643 649 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 ANKRD20A4Q4UJ75 823 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 FNBP1LQ5T0N5 605 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 CES3Q6UWW8 571 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 PACS1Q6VY07 963 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 PIANPQ8IYJ0 282 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 RASGEF1AQ8N9B8 481 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 WDR48Q8TAF3 677 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 DEPDC7Q96QD5 511 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 EBNA1BP2Q99848 306 aaKnown RBP13.32□□□□□ -0.28
RPAIN-213ENST00000573577 LRRC1Q9BTT6 524 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 RABGEF1Q9UJ41 708 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 PLEKHM1Q9Y4G2 1056 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 MYLKQ15746 1914 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 EPG5Q9HCE0 2579 aa13.32□□□□□ -0.28
RPAIN-213ENST00000573577 MAP1BP46821 2468 aaKnown RBP13.32□□□□□ -0.28
RPAIN-213ENST00000573577 KNTC1P50748 2209 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 EIF3HO15372 352 aaKnown RBP eCLIP13.31□□□□□ -0.28
RPAIN-213ENST00000573577 NUDT21O43809 227 aaKnown RBP13.31□□□□□ -0.28
RPAIN-213ENST00000573577 TCEA3O75764 348 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 GSTM1P09488 218 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 GLB1P16278 677 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 CA5AP35218 305 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 PRLHRP49683 370 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 CTSCP53634 463 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 GSTM4Q03013 218 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 THOC5Q13769 683 aaKnown RBP13.31□□□□□ -0.28
RPAIN-213ENST00000573577 LONRF1Q17RB8 773 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 BCL7AQ4VC05 210 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 RNF187Q5TA31 235 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-213ENST00000573577 RBM44Q6ZP01 1051 aaKnown RBP13.31□□□□□ -0.28
RPAIN-213ENST00000573577 CENPUQ71F23 418 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 DET1Q7L5Y6 550 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 AMZ2Q86W34 360 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 C17orf82Q86X59 251 aaPredicted RBP13.31□□□□□ -0.28
RPAIN-213ENST00000573577 ZNF547Q8IVP9 402 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 LMNTD2Q8IXW0 634 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.31□□□□□ -0.28
RPAIN-213ENST00000573577 CALML6Q8TD86 181 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 NXPE2Q96DL1 559 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 SGF29Q96ES7 293 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 CARD6Q9BX69 1037 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 FAM129AQ9BZQ8 928 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 FOXP3Q9BZS1 431 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 OSGEPL1Q9H4B0 414 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 CCDC86Q9H6F5 360 aaKnown RBP13.31□□□□□ -0.28
RPAIN-213ENST00000573577 KLC4Q9NSK0 619 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 LRIT1Q9P2V4 623 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 KCNK6Q9Y257 313 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 VPS9D1Q9Y2B5 631 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 RNF215Q9Y6U7 377 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 FAM169AQ9Y6X4 670 aa13.31□□□□□ -0.28
RPAIN-213ENST00000573577 OR5K4A6NMS3 321 aa13.3□□□□□ -0.28
RPAIN-213ENST00000573577 NTN3O00634 580 aaPredicted RBP13.3□□□□□ -0.28
RPAIN-213ENST00000573577 CASC3O15234 703 aaKnown RBP13.3□□□□□ -0.28
RPAIN-213ENST00000573577 TP73O15350 636 aa13.3□□□□□ -0.28
RPAIN-213ENST00000573577 CSO75390 466 aaKnown RBP13.3□□□□□ -0.28
RPAIN-213ENST00000573577 NDUFS3O75489 264 aa13.3□□□□□ -0.28
RPAIN-213ENST00000573577 POP7O75817 140 aaKnown RBP13.3□□□□□ -0.28
RPAIN-213ENST00000573577 RPLP0P05388 317 aaKnown RBP13.3□□□□□ -0.28
RPAIN-213ENST00000573577 OR56A5P0C7T3 313 aa13.3□□□□□ -0.28
RPAIN-213ENST00000573577 PRSS56P0CW18 603 aa13.3□□□□□ -0.28
RPAIN-213ENST00000573577 PNLIPP16233 465 aa13.3□□□□□ -0.28
RPAIN-213ENST00000573577 OGNP20774 298 aaKnown RBP13.3□□□□□ -0.28
RPAIN-213ENST00000573577 IDSP22304 550 aa13.3□□□□□ -0.28
RPAIN-213ENST00000573577 ARNTP27540 789 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms