RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 CLDN19Q8N6F1 224 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 OR4L1Q8NH43 312 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 SLC37A2Q8TED4 501 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 NAT6Q93015 286 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.55■□□□□ 0.08
CHD3-215ENST00000572750 ZNF669Q96BR6 464 aaPredicted RBP15.55■□□□□ 0.08
CHD3-215ENST00000572750 CCDC3Q9BQI4 270 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 PRDM8Q9NQV8 689 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 CATSPERZQ9NTU4 200 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 MARCH4Q9P2E8 410 aaPredicted RBP15.55■□□□□ 0.08
CHD3-215ENST00000572750 RABGEF1Q9UJ41 708 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 MRFAP1Q9Y605 127 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 MAD1L1Q9Y6D9 718 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 RNF215Q9Y6U7 377 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 MYO18BQ8IUG5 2567 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 ACACAQ13085 2346 aa15.55■□□□□ 0.08
CHD3-215ENST00000572750 A6NCN8 305 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 PRR19A6NJB7 356 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 SDR42E2A6NKP2 422 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 EFCAB8A8MWE9 144 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 GOLGA8KD6RF30 607 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 GOLGA8TH3BQL2 631 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 POP7O75817 140 aaKnown RBP15.54■□□□□ 0.08
CHD3-215ENST00000572750 C1QL1O75973 258 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 TRIM16O95361 564 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 GP1BAP07359 652 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 ATP1B2P14415 290 aaPredicted RBP15.54■□□□□ 0.08
CHD3-215ENST00000572750 PRLHRP49683 370 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 ITGA8P53708 1063 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 DRG2P55039 364 aaKnown RBP15.54■□□□□ 0.08
CHD3-215ENST00000572750 WHAMMP3Q1A5X7 153 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 BCL7AQ4VC05 210 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 FASTKD1Q53R41 847 aaKnown RBP15.54■□□□□ 0.08
CHD3-215ENST00000572750 HIBCHQ6NVY1 386 aaPredicted RBP15.54■□□□□ 0.08
CHD3-215ENST00000572750 FAM83HQ6ZRV2 1179 aaPredicted RBP15.54■□□□□ 0.08
CHD3-215ENST00000572750 LDB1Q86U70 411 aaPredicted RBP15.54■□□□□ 0.08
CHD3-215ENST00000572750 AMZ2Q86W34 360 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 MARCH9Q86YJ5 346 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 OTUD6BQ8N6M0 293 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 HNRNPLLQ8WVV9 542 aaKnown RBP15.54■□□□□ 0.08
CHD3-215ENST00000572750 PWWP2AQ96N64 755 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 DPH5Q9H2P9 285 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 SYNDIG1Q9H7V2 258 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 IL1RAPL1Q9NZN1 696 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 SNX24Q9Y343 169 aa15.54■□□□□ 0.08
CHD3-215ENST00000572750 TRBV23OR9-2A0A075B6M9 112 aa15.53■□□□□ 0.08
CHD3-215ENST00000572750 FAM149AA5PLN7 773 aa15.53■□□□□ 0.08
CHD3-215ENST00000572750 FAM187AA6NFU0 413 aa15.53■□□□□ 0.08
CHD3-215ENST00000572750 PDZK1P1A8MUH7 402 aa15.53■□□□□ 0.08
CHD3-215ENST00000572750 TP73O15350 636 aa15.53■□□□□ 0.08
CHD3-215ENST00000572750 OR1I1O60431 355 aa15.53■□□□□ 0.08
CHD3-215ENST00000572750 VAPBO95292 243 aa15.53■□□□□ 0.08
CHD3-215ENST00000572750 F3P13726 295 aa15.53■□□□□ 0.08
CHD3-215ENST00000572750 VCLP18206 1134 aa15.53■□□□□ 0.08
CHD3-215ENST00000572750 RPL10P27635 214 aaKnown RBP15.53■□□□□ 0.08
CHD3-215ENST00000572750 INSM1Q01101 510 aaPredicted RBP15.53■□□□□ 0.08
CHD3-215ENST00000572750 DHX9Q08211 1270 aaKnown RBP15.53■□□□□ 0.08
CHD3-215ENST00000572750 NFE2L1Q14494 772 aa15.53■□□□□ 0.08
CHD3-215ENST00000572750 MSS51Q4VC12 460 aa15.53■□□□□ 0.08
CHD3-215ENST00000572750 HES3Q5TGS1 186 aa15.53■□□□□ 0.08
CHD3-215ENST00000572750 KIAA0930Q6ICG6 404 aaPredicted RBP15.53■□□□□ 0.08
CHD3-215ENST00000572750 PACS1Q6VY07 963 aa15.53■□□□□ 0.08
CHD3-215ENST00000572750 C17orf82Q86X59 251 aaPredicted RBP15.53■□□□□ 0.08
CHD3-215ENST00000572750 SFRP1Q8N474 314 aa15.53■□□□□ 0.08
CHD3-215ENST00000572750 ARL14Q8N4G2 192 aa15.53■□□□□ 0.08
CHD3-215ENST00000572750 MAPK15Q8TD08 544 aa15.53■□□□□ 0.08
CHD3-215ENST00000572750 HEXDCQ8WVB3 486 aa15.53■□□□□ 0.08
CHD3-215ENST00000572750 ZNF514Q96K75 400 aaPredicted RBP15.53■□□□□ 0.08
CHD3-215ENST00000572750 SIGLEC10Q96LC7 697 aa15.53■□□□□ 0.08
CHD3-215ENST00000572750 FCRL3Q96P31 734 aaPredicted RBP15.53■□□□□ 0.08
CHD3-215ENST00000572750 SCHIP1Q9P0W5 487 aaPredicted RBP15.53■□□□□ 0.08
CHD3-215ENST00000572750 PRSS21Q9Y6M0 314 aa15.53■□□□□ 0.08
CHD3-215ENST00000572750 RPS6KL1Q9Y6S9 549 aa15.53■□□□□ 0.08
CHD3-215ENST00000572750 ATMQ13315 3056 aa15.52■□□□□ 0.08
CHD3-215ENST00000572750 FAM237BA0A1B0GVD1 139 aa15.52■□□□□ 0.08
CHD3-215ENST00000572750 CD3EAPO15446 510 aaKnown RBP15.52■□□□□ 0.08
CHD3-215ENST00000572750 OPA1O60313 960 aa15.52■□□□□ 0.08
CHD3-215ENST00000572750 TUBB4AP04350 444 aa15.52■□□□□ 0.08
CHD3-215ENST00000572750 GLB1P16278 677 aa15.52■□□□□ 0.08
CHD3-215ENST00000572750 CLCNKAP51800 687 aa15.52■□□□□ 0.08
CHD3-215ENST00000572750 DMPKQ09013 629 aa15.52■□□□□ 0.08
CHD3-215ENST00000572750 BIRC2Q13490 618 aa15.52■□□□□ 0.08
CHD3-215ENST00000572750 ITIH4Q14624 930 aa15.52■□□□□ 0.08
CHD3-215ENST00000572750 BBS9Q3SYG4 887 aa15.52■□□□□ 0.08
CHD3-215ENST00000572750 ANKRD20A4Q4UJ75 823 aa15.52■□□□□ 0.08
CHD3-215ENST00000572750 DNAJC21Q5F1R6 531 aaKnown RBP15.52■□□□□ 0.08
CHD3-215ENST00000572750 AARS2Q5JTZ9 985 aaKnown RBP15.52■□□□□ 0.08
CHD3-215ENST00000572750 XKR5Q6UX68 686 aa15.52■□□□□ 0.08
CHD3-215ENST00000572750 MAATS1Q7Z4T9 603 aa15.52■□□□□ 0.08
CHD3-215ENST00000572750 ZNF761Q86XN6 746 aaPredicted RBP15.52■□□□□ 0.08
CHD3-215ENST00000572750 LILRA3Q8N6C8 439 aaPredicted RBP15.52■□□□□ 0.08
CHD3-215ENST00000572750 Q8N9G6 341 aaPredicted RBP15.52■□□□□ 0.08
CHD3-215ENST00000572750 KIF18AQ8NI77 898 aa15.52■□□□□ 0.08
CHD3-215ENST00000572750 STAMBPL1Q96FJ0 436 aa15.52■□□□□ 0.08
CHD3-215ENST00000572750 CRELD1Q96HD1 420 aa15.52■□□□□ 0.08
CHD3-215ENST00000572750 SGSM3Q96HU1 749 aa15.52■□□□□ 0.08
CHD3-215ENST00000572750 ERP44Q9BS26 406 aa15.52■□□□□ 0.08
CHD3-215ENST00000572750 LRIT1Q9P2V4 623 aa15.52■□□□□ 0.08
CHD3-215ENST00000572750 ANAPC5Q9UJX4 755 aa15.52■□□□□ 0.08
CHD3-215ENST00000572750 NUDT21O43809 227 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms