RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 KIAA1328Q86T90 577 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 FAM129CQ86XR2 697 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ZSCAN1Q8NBB4 408 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ZNF398Q8TD17 642 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 HES6Q96HZ4 224 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 LINC00615Q96LM1 132 aaPredicted RBP16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ZNF768Q9H5H4 540 aaKnown RBP16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 C10orf88Q9H8K7 445 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 UGT1A7Q9HAW7 530 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 UGT1A10Q9HAW8 530 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 UGT1A8Q9HAW9 530 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 DNAJC16Q9Y2G8 782 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ARL5AQ9Y689 179 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 SLC30A1Q9Y6M5 507 aa16.77■□□□□ 0.28
MAP1LC3B-208ENST00000570189 BSNQ9UPA5 3926 aa16.77■□□□□ 0.27
MAP1LC3B-208ENST00000570189 MACROD2A1Z1Q3 448 aa16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 GOLGA6L9A6NEM1 432 aa16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 F5H423 210 aaPredicted RBP16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 CAPN5O15484 640 aaPredicted RBP16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 DDX3YO15523 660 aaKnown RBP16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 POP7O75817 140 aaKnown RBP16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 SRP72O76094 671 aaKnown RBP16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 RPL10P27635 214 aaKnown RBP16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 CA5AP35218 305 aa16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 HALP42357 657 aa16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 ZNF140P52738 457 aaPredicted RBP16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 SRSF6Q13247 344 aaKnown RBP16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 GPR18Q14330 331 aa16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 CLCA4Q14CN2 919 aa16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 LONRF2Q1L5Z9 754 aa16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 BCL7AQ4VC05 210 aa16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 METRNLQ641Q3 311 aa16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 ANKS6Q68DC2 871 aa16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 RNF10Q8N5U6 811 aaKnown RBP16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 OR4K2Q8NGD2 314 aa16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 CCDC110Q8TBZ0 833 aa16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 ZFPM2Q8WW38 1151 aa16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 LRRC45Q96CN5 670 aa16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 CXorf40BQ96DE9 158 aa16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 TBL1YQ9BQ87 522 aa16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 TRIT1Q9H3H1 467 aaKnown RBP16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 WDR37Q9Y2I8 494 aa16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 ZNF462Q96JM2 2506 aa16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 BOD1L1Q8NFC6 3051 aa16.76■□□□□ 0.27
MAP1LC3B-208ENST00000570189 MGAT4DA6NG13 374 aa16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 OR52A4PA6NMU1 304 aa16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 H7C0S8 307 aa16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 AGRPO00253 132 aa16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 GPR39O43194 453 aa16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 WT1P19544 449 aaPredicted RBP16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 PSMA3P25788 255 aa16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 MAP4P27816 1152 aaKnown RBP16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 HADHAP40939 763 aa16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 DRG2P55039 364 aaKnown RBP16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 GFERP55789 205 aa16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 PARP6Q2NL67 630 aa16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 LINC00303Q3SY05 128 aa16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 AADACL2Q6P093 401 aa16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 TMEM220Q6QAJ8 160 aa16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 VASH2Q86V25 355 aa16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 BEND7Q8N7W2 519 aaPredicted RBP16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 OR2L2Q8NH16 312 aa16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 SLC35B2Q8TB61 432 aa16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 HEXDCQ8WVB3 486 aa16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 ULK4Q96C45 1275 aa16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 SLC12A9Q9BXP2 914 aa16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 ACSL5Q9ULC5 683 aa16.75■□□□□ 0.27
MAP1LC3B-208ENST00000570189 IGLV3-16A0A075B6K0 115 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 TRBV5-4A0A0C4DH59 114 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 GOLGA6L3A6NEY3 463 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 LDB2O43679 373 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 BUD23O43709 281 aaKnown RBP16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 SGTAO43765 313 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 RAD1O60671 282 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 DLGAP3O95886 979 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 AMD1P17707 334 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 MSH3P20585 1137 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 MAPK9P45984 424 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 PTPRCAPQ14761 206 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 SEPT7Q16181 437 aaKnown RBP16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 RPE65Q16518 533 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 P3H1Q32P28 736 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 GPR33Q49SQ1 333 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 CRTC2Q53ET0 693 aaPredicted RBP16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 SNAP47Q5SQN1 464 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 FAM83HQ6ZRV2 1179 aaPredicted RBP16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 CACNA2D3Q8IZS8 1091 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 NLGN4XQ8N0W4 816 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 NLGN4YQ8NFZ3 816 aaPredicted RBP16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 KLHL6Q8WZ60 621 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 ZDHHC12Q96GR4 267 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 SEMA4CQ9C0C4 833 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 ASB8Q9H765 288 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 FKBPLQ9UIM3 349 aa16.74■□□□□ 0.27
MAP1LC3B-208ENST00000570189 C17orf113A0A1B0GUU1 675 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 OR2AG2A6NM03 316 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 A8MU76 341 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 POLR1CO15160 346 aaPredicted RBP16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 SFTPCP11686 197 aa16.73■□□□□ 0.27
MAP1LC3B-208ENST00000570189 PPM1FP49593 454 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms