RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 SNX1Q13596 522 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 ITGA9Q13797 1035 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 KRT33BQ14525 404 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 NOMO1Q15155 1222 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 SHBQ15464 509 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 AMZ1Q400G9 498 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 C3orf38Q5JPI3 329 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 PHF19Q5T6S3 580 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 ALG1LQ6GMV1 187 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 GUSBP11Q6P575 273 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 ZNF449Q6P9G9 518 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 OGFOD3Q6PK18 319 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 LVRNQ6Q4G3 990 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 CRTC3Q6UUV7 619 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 DNAJC14Q6Y2X3 702 aaPredicted RBP4.78□□□□□ -1.64
CNOT1-219ENST00000569882 PPP1R21Q6ZMI0 780 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 DBX2Q6ZNG2 339 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 RBM44Q6ZP01 1051 aaKnown RBP4.78□□□□□ -1.64
CNOT1-219ENST00000569882 CHST15Q7LFX5 561 aaPredicted RBP4.78□□□□□ -1.64
CNOT1-219ENST00000569882 TMPRSS7Q7RTY8 843 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 TRIM74Q86UV6 250 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 JAMLQ86YT9 394 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 TRAPPC5Q8IUR0 188 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 LRRC8AQ8IWT6 810 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 ZNF567Q8N184 647 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 SLC25A45Q8N413 288 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 TAB3Q8N5C8 712 aaPredicted RBP4.78□□□□□ -1.64
CNOT1-219ENST00000569882 RNF10Q8N5U6 811 aaKnown RBP4.78□□□□□ -1.64
CNOT1-219ENST00000569882 DNAAF3Q8N9W5 541 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 FAM181AQ8N9Y4 354 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 KYQ8NBH2 561 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 TRIM58Q8NG06 486 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 WDR48Q8TAF3 677 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 BAHD1Q8TBE0 780 aaPredicted RBP4.78□□□□□ -1.64
CNOT1-219ENST00000569882 ARRDC2Q8TBH0 407 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 PIH1D2Q8WWB5 315 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 MAIP1Q8WWC4 291 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 OR1E3Q8WZA6 343 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 UBXN4Q92575 508 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 SCAMP4Q969E2 229 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.78□□□□□ -1.64
CNOT1-219ENST00000569882 MRRFQ96E11 262 aaKnown RBP4.78□□□□□ -1.64
CNOT1-219ENST00000569882 IMP4Q96G21 291 aaKnown RBP4.78□□□□□ -1.64
CNOT1-219ENST00000569882 DCUN1D1Q96GG9 259 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 TEKT5Q96M29 485 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 TBATAQ96M53 351 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 COQ10AQ96MF6 247 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 OLFM3Q96PB7 478 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 GFM1Q96RP9 751 aaKnown RBP4.78□□□□□ -1.64
CNOT1-219ENST00000569882 MCCC1Q96RQ3 725 aaPredicted RBP4.78□□□□□ -1.64
CNOT1-219ENST00000569882 CCDC3Q9BQI4 270 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 ZSCAN5AQ9BUG6 496 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 FICDQ9BVA6 458 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 TMEM168Q9H0V1 697 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 ABCG8Q9H221 673 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 GBA3Q9H227 469 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 TCEAL2Q9H3H9 227 aaPredicted RBP4.78□□□□□ -1.64
CNOT1-219ENST00000569882 TRABDQ9H4I3 376 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 MAGEE1Q9HCI5 957 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 EPB41L5Q9HCM4 733 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 FGF22Q9HCT0 170 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 BPIFA1Q9NP55 256 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.78□□□□□ -1.645e-6■■□□□ 11.4
CNOT1-219ENST00000569882 FEZ2Q9UHY8 353 aaPredicted RBP4.78□□□□□ -1.64
CNOT1-219ENST00000569882 SUFUQ9UMX1 484 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 EFR3BQ9Y2G0 817 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 TMEM98Q9Y2Y6 226 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 CAPN6Q9Y6Q1 641 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 DGKBQ9Y6T7 804 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 U3KQE9 123 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 RP1P56715 2156 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 LRP4O75096 1905 aa4.78□□□□□ -1.64
CNOT1-219ENST00000569882 CACNA1AO00555 2505 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 TRBV23OR9-2A0A075B6M9 112 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 GOLGA6L10A0A0M3HER8 536 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 GLYATL1P3A0A0U1RQE8 302 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 TRABD2BA6NFA1 517 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 EIF4E1BA6NMX2 242 aaKnown RBP4.77□□□□□ -1.65
CNOT1-219ENST00000569882 TMX2-CTNND1H3BSU7 103 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 PSMD3O43242 534 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 KIF5CO60282 957 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 CEP104O60308 925 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 OPA1O60313 960 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 USP12O75317 370 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 PPFIA2O75334 1257 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 GCATO75600 419 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 TCEA3O75764 348 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 CDK14O94921 469 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 MT-CO3P00414 261 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 PROS1P07225 676 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 IVLP07476 585 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 MMP2P08253 660 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 HOXC4P09017 264 aaPredicted RBP4.77□□□□□ -1.65
CNOT1-219ENST00000569882 FAM87AP0C7U9 286 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 PYGMP11217 842 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 MSH3P20585 1137 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 ITGALP20701 1170 aa4.77□□□□□ -1.65
CNOT1-219ENST00000569882 AK4P27144 223 aaPredicted RBP4.77□□□□□ -1.65
CNOT1-219ENST00000569882 PBLDP30039 288 aaPredicted RBP4.77□□□□□ -1.65
CNOT1-219ENST00000569882 PTPN7P35236 360 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms