RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 GABRB2P47870 512 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 MRPS25P82663 173 aaKnown RBP6.59□□□□□ -1.35
SMG1-217ENST00000569764 TNFRSF17Q02223 184 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 PPP3CAQ08209 521 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 SCRN3Q0VDG4 424 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 KLF1Q13351 362 aaPredicted RBP6.59□□□□□ -1.35
SMG1-217ENST00000569764 P3H1Q32P28 736 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 TTMPQ5BVD1 217 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 EFHC2Q5JST6 749 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 NDUFAF5Q5TEU4 345 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 IZUMO3Q5VZ72 239 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 CTRB2Q6GPI1 263 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 ZNF571Q7Z3V5 609 aaPredicted RBP6.59□□□□□ -1.35
SMG1-217ENST00000569764 ZNF554Q86TJ5 538 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 ADCK1Q86TW2 530 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 MOGAT3Q86VF5 341 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 LSRQ86X29 649 aaPredicted RBP6.59□□□□□ -1.35
SMG1-217ENST00000569764 ADIPOR1Q96A54 375 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 NUP58Q9BVL2 599 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 TSSK1BQ9BXA7 367 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 ITPAQ9BY32 194 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 FTSJ1Q9UET6 329 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 FAF1Q9UNN5 650 aaPredicted RBP6.59□□□□□ -1.35
SMG1-217ENST00000569764 SIP14410 1827 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 KAT6AQ92794 2004 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 PLXNA1Q9UIW2 1896 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 C2orf72A6NCS6 295 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 AKR7A2O43488 359 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 NDUFS6O75380 124 aaKnown RBP6.59□□□□□ -1.35
SMG1-217ENST00000569764 PCDH8O95206 1070 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 OXSR1O95747 527 aaPredicted RBP6.59□□□□□ -1.35
SMG1-217ENST00000569764 AK1P00568 194 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 ADH5P11766 374 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 EPCAMP16422 314 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 ADORA2BP29275 332 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 PRKAA2P54646 552 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 OCRLQ01968 901 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 STX5Q13190 355 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 AANATQ16613 207 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 NHSL2Q5HYW2 709 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 LINC00346Q8IVM7 164 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 APLFQ8IW19 511 aaPredicted RBP6.59□□□□□ -1.35
SMG1-217ENST00000569764 CADM3Q8N126 398 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 LZTR1Q8N653 840 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 RSC1A1Q92681 617 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 TBCDQ9BTW9 1192 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 GPR63Q9BZJ6 419 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 DCDC2Q9UHG0 476 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 IGHEP01854 428 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 CALB1P05937 261 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 ARAFP10398 606 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 RALBP11234 206 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 CSTF2P33240 577 aaKnown RBP eCLIP6.59□□□□□ -1.35
SMG1-217ENST00000569764 PTPN9P43378 593 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 YWHAZP63104 245 aaKnown RBP6.59□□□□□ -1.35
SMG1-217ENST00000569764 NPRL3Q12980 569 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 CEBPEQ15744 281 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 ADGRF1Q5T601 910 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 KANK2Q63ZY3 851 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 VHLLQ6RSH7 139 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 NPNTQ6UXI9 565 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 C12orf76Q8N812 135 aaPredicted RBP6.59□□□□□ -1.35
SMG1-217ENST00000569764 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.59□□□□□ -1.35
SMG1-217ENST00000569764 METTL2AQ96IZ6 378 aaKnown RBP6.59□□□□□ -1.35
SMG1-217ENST00000569764 CASD1Q96PB1 797 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 PGLYRP2Q96PD5 576 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 SLC29A1Q99808 456 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 ANKZF1Q9H8Y5 726 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 NGBQ9NPG2 151 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 CLCA2Q9UQC9 943 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 SLC27A5Q9Y2P5 690 aa6.59□□□□□ -1.35
SMG1-217ENST00000569764 SPEGQ15772 3267 aa6.59□□□□□ -1.36
SMG1-217ENST00000569764 SLC16A3O15427 465 aaKnown RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 ACAA1P09110 424 aaPredicted RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 MYOGP15173 224 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 UCHL3P15374 230 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 H2AFXP16104 143 aaPredicted RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 ACO1P21399 889 aaKnown RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 NTSR1P30989 418 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 SLC15A1P46059 708 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 RPS9P46781 194 aaKnown RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 RGS7P49802 495 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 GNG10P50151 68 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 PRSS12P56730 875 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 JAM2P57087 298 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 TFF2Q03403 129 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 OVGP1Q12889 678 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 PTK6Q13882 451 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 ATPAF1Q5TC12 328 aaPredicted RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 TRAF7Q6Q0C0 670 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 RFX6Q8HWS3 928 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 TMC8Q8IU68 726 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 CCDC105Q8IYK2 499 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 ASCC1Q8N9N2 400 aaKnown RBP6.58□□□□□ -1.36
SMG1-217ENST00000569764 SCAIQ8N9R8 606 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 STYXQ8WUJ0 223 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 FGF13Q92913 245 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 PSMB7Q99436 277 aa6.58□□□□□ -1.36
SMG1-217ENST00000569764 KXD1Q9BQD3 176 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms