RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 MT-ND3P03897 115 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 CCNYL3P0C7X3 344 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 BRAFP15056 766 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 NFKB1P19838 968 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 COMTP21964 271 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 MSNP26038 577 aaKnown RBP12.88□□□□□ -0.35
SPG7-221ENST00000569720 OAS2P29728 719 aaKnown RBP12.88□□□□□ -0.35
SPG7-221ENST00000569720 DLSTP36957 453 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 SPAM1P38567 509 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 CDKN2BP42772 138 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 LEPRP48357 1165 aaKnown RBP12.88□□□□□ -0.35
SPG7-221ENST00000569720 WNT3AP56704 352 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 SH3BP2P78314 561 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 ITGA9Q13797 1035 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 PPP2R5EQ16537 467 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 KHDC1Q4VXA5 237 aaKnown RBP12.88□□□□□ -0.35
SPG7-221ENST00000569720 GLT6D1Q7Z4J2 308 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 C11orf96Q7Z7L8 435 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 AMZ2Q86W34 360 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 SLC25A41Q8N5S1 370 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 GALNT6Q8NCL4 622 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 RSC1A1Q92681 617 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 P3H4Q92791 437 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 VAT1Q99536 393 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 RAB33BQ9H082 229 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 ZNF71Q9NQZ8 489 aaPredicted RBP12.88□□□□□ -0.35
SPG7-221ENST00000569720 SAE1Q9UBE0 346 aaPredicted RBP12.88□□□□□ -0.35
SPG7-221ENST00000569720 EPHA6Q9UF33 1036 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 LNPEPQ9UIQ6 1025 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 KCND3Q9UK17 655 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 TMPRSS11EQ9UL52 423 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 PKP3Q9Y446 797 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 KCTD3Q9Y597 815 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 FLNCQ14315 2725 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 MAST4O15021 2626 aa12.88□□□□□ -0.35
SPG7-221ENST00000569720 PTPN13Q12923 2485 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 GLYATL1P3A0A0U1RQE8 302 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 KIAA0754O94854 1291 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 FGF5P12034 268 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 HLA-DPA1P20036 260 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 CD68P34810 354 aaPredicted RBP12.87□□□□□ -0.35
SPG7-221ENST00000569720 CASRP41180 1078 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 WASHC5Q12768 1159 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 MPP3Q13368 585 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 SKIDA1Q1XH10 827 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.87□□□□□ -0.35
SPG7-221ENST00000569720 TFDP3Q5H9I0 405 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 SIRPB2Q5JXA9 342 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 KDELC1Q6UW63 502 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 FAM151BQ6UXP7 276 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 SPOCD1Q6ZMY3 1216 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 FAM92BQ6ZTR7 304 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 PID1Q7Z2X4 250 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 ZC3H18Q86VM9 953 aaKnown RBP12.87□□□□□ -0.35
SPG7-221ENST00000569720 PPP1R3BQ86XI6 285 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 TTC30BQ8N4P2 665 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 BLOC1S5Q8TDH9 187 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 KLHL6Q8WZ60 621 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 ABHD17AQ96GS6 310 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 ELMO2Q96JJ3 720 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 FCRL5Q96RD9 977 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 KCNF1Q9H3M0 494 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 PDE7BQ9NP56 450 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 IL26Q9NPH9 171 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 IL17CQ9P0M4 197 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 CROTQ9UKG9 612 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 PPP2R2CQ9Y2T4 447 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 HYOU1Q9Y4L1 999 aa12.87□□□□□ -0.35
SPG7-221ENST00000569720 MRPS18BQ9Y676 258 aaKnown RBP12.87□□□□□ -0.35
SPG7-221ENST00000569720 DNMT3AQ9Y6K1 912 aaPredicted RBP12.87□□□□□ -0.35
SPG7-221ENST00000569720 HACD1B0YJ81 288 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 KIF1CO43896 1103 aaKnown RBP12.86□□□□□ -0.35
SPG7-221ENST00000569720 KATNA1O75449 491 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 SPAG6O75602 509 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 POP7O75817 140 aaKnown RBP12.86□□□□□ -0.35
SPG7-221ENST00000569720 ZRANB2O95218 330 aaKnown RBP eCLIP12.86□□□□□ -0.35
SPG7-221ENST00000569720 PECAM1P16284 738 aaPredicted RBP12.86□□□□□ -0.35
SPG7-221ENST00000569720 ZNF28P17035 718 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 NELFEP18615 380 aaKnown RBP12.86□□□□□ -0.35
SPG7-221ENST00000569720 ARL4DP49703 201 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 DMPKQ09013 629 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 PLCL1Q15111 1095 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 NOMO1Q15155 1222 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 SLC1A5Q15758 541 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 CHRNA6Q15825 494 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 TAZQ16635 292 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 LONRF2Q1L5Z9 754 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 LACTB2Q53H82 288 aaPredicted RBP12.86□□□□□ -0.35
SPG7-221ENST00000569720 TMEM220Q6QAJ8 160 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 CCDC50Q8IVM0 306 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 SYCE1Q8N0S2 351 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 ZNF567Q8N184 647 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 SIDT2Q8NBJ9 832 aaKnown RBP12.86□□□□□ -0.35
SPG7-221ENST00000569720 DDHD1Q8NEL9 900 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 IPMKQ8NFU5 416 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 UBXN4Q92575 508 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 ZNF514Q96K75 400 aaPredicted RBP12.86□□□□□ -0.35
SPG7-221ENST00000569720 MRGPRX2Q96LB1 330 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 FERMT1Q9BQL6 677 aa12.86□□□□□ -0.35
SPG7-221ENST00000569720 FSD1LQ9BXM9 530 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms