RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	TRPC4AP	Q8TEL6	797 aa		3	□□□□□ -1.93
UBR1-209	ENST00000569243	PPP4R1	Q8TF05	950 aa		3	□□□□□ -1.93
UBR1-209	ENST00000569243	ZUFSP	Q96AP4	578 aa		3	□□□□□ -1.93
UBR1-209	ENST00000569243	RRP36	Q96EU6	259 aa	Known RBP	3	□□□□□ -1.93
UBR1-209	ENST00000569243	SIX2	Q9NPC8	291 aa		3	□□□□□ -1.93
UBR1-209	ENST00000569243	TMEM181	Q9P2C4	612 aa		3	□□□□□ -1.93
UBR1-209	ENST00000569243	CACNG5	Q9UF02	275 aa		3	□□□□□ -1.93
UBR1-209	ENST00000569243	GTF2A1L	Q9UNN4	478 aa		3	□□□□□ -1.93
UBR1-209	ENST00000569243	YIPF1	Q9Y548	306 aa		3	□□□□□ -1.93
UBR1-209	ENST00000569243	KLF2	Q9Y5W3	355 aa	Predicted RBP	3	□□□□□ -1.93
UBR1-209	ENST00000569243		A0A1W2PPH5	198 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	EIF4E1B	A6NMX2	242 aa	Known RBP	2.99	□□□□□ -1.93
UBR1-209	ENST00000569243		E9PQ18	207 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	SNAP23	O00161	211 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	SCAMP1	O15126	338 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	TPD52L2	O43399	206 aa	Known RBP	2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	NDUFS3	O75489	264 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	WISP2	O76076	250 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	SORBS2	O94875	1100 aa	Known RBP	2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	CCNDBP1	O95273	360 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	CLEC3B	P05452	202 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	CEBPB	P17676	345 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	MAP2K2	P36507	400 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	PPARD	Q03181	441 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	TMEM115	Q12893	351 aa	Predicted RBP	2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	LRMP	Q12912	555 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	ADAMTSL4-AS1	Q5T5F5	129 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	ALS2CL	Q60I27	953 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	SH2D5	Q6ZV89	423 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	ARHGAP12	Q8IWW6	846 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	SLC5A8	Q8N695	610 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	EMC1	Q8N766	993 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	ZNF614	Q8N883	585 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	PRMT6	Q96LA8	375 aa	Predicted RBP	2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	SLX1A	Q9BQ83	275 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	RTP3	Q9BQQ7	232 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	SYT11	Q9BT88	431 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	PDCL3	Q9H2J4	239 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	TRPC7	Q9HCX4	862 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	ECHDC1	Q9NTX5	307 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	SLC38A7	Q9NVC3	462 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	ATAD3A	Q9NVI7	634 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	KLHL9	Q9P2J3	617 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	EXOG	Q9Y2C4	368 aa	Known RBP	2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	MRPS28	Q9Y2Q9	187 aa	Known RBP	2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	CLIC4	Q9Y696	253 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	ADAMTS9	Q9P2N4	1935 aa		2.99	□□□□□ -1.93
UBR1-209	ENST00000569243	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	MAGEB17	A8MXT2	336 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	TMEM178B	H3BS89	294 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	CSPG5	O95196	566 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	IL7R	P16871	459 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	CASP6	P55212	293 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	GOLGA8DP	Q0D2H9	430 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	NIPAL4	Q0D2K0	466 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	UGP2	Q16851	508 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	PCGF3	Q3KNV8	242 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	FAM109B	Q6ICB4	259 aa	Predicted RBP	2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	GPALPP1	Q8IXQ4	340 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	DIS3L2	Q8IYB7	885 aa	Known RBP	2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	GBGT1	Q8N5D6	347 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	BMPER	Q8N8U9	685 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	PCYOX1L	Q8NBM8	494 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	NAXE	Q8NCW5	288 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	ZNRF4	Q8WWF5	429 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	SMPDL3B	Q92485	455 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	GIMAP5	Q96F15	307 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	OXNAD1	Q96HP4	312 aa	Predicted RBP	2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	PSMD1	Q99460	953 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	SEMA3C	Q99985	751 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	VGLL1	Q99990	258 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	CABLES2	Q9BTV7	478 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	RANGRF	Q9HD47	186 aa	Predicted RBP	2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	CCDC177	Q9NQR7	707 aa	Predicted RBP	2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	ZNF71	Q9NQZ8	489 aa	Predicted RBP	2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	PCDHB16	Q9NRJ7	776 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	TRMT1	Q9NXH9	659 aa	Known RBP	2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	COQ3	Q9NZJ6	369 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	COPG2	Q9UBF2	871 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	CNOT8	Q9UFF9	292 aa	Known RBP	2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	PYGO1	Q9Y3Y4	419 aa		2.98	□□□□□ -1.93
UBR1-209	ENST00000569243	FLT1	P17948	1338 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	STK36	Q9NRP7	1315 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	ATP2A1	O14983	1001 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	SMAD9	O15198	467 aa	Known RBP	2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	GPR137B	O60478	399 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	DDX58	O95786	925 aa	Known RBP	2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	ICAM1	P05362	532 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	LIPF	P07098	398 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	ACTN1	P12814	892 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	PRG2	P13727	222 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	GATA1	P15976	413 aa	Predicted RBP	2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	ACADL	P28330	430 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	WNT5A	P41221	380 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	CCR9	P51686	369 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	MVP	Q14764	893 aa	Known RBP	2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	TEAD2	Q15562	447 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	ZNF239	Q16600	458 aa	Known RBP	2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	NSUN5P2	Q63ZY6	315 aa		2.97	□□□□□ -1.93
UBR1-209	ENST00000569243	R3HCC1L	Q7Z5L2	792 aa	Known RBP	2.97	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms