RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 ENDOVQ8N8Q3 282 aaKnown RBP12.2□□□□□ -0.46
SNX29-207ENST00000568949 SLC38A9Q8NBW4 561 aa12.2□□□□□ -0.46
SNX29-207ENST00000568949 GPR26Q8NDV2 337 aa12.2□□□□□ -0.46
SNX29-207ENST00000568949 ZNF501Q96CX3 271 aaPredicted RBP12.2□□□□□ -0.46
SNX29-207ENST00000568949 RANBP9Q96S59 729 aa12.2□□□□□ -0.46
SNX29-207ENST00000568949 BARD1Q99728 777 aaKnown RBP12.2□□□□□ -0.46
SNX29-207ENST00000568949 ADGRE3Q9BY15 652 aa12.2□□□□□ -0.46
SNX29-207ENST00000568949 ZFYVE1Q9HBF4 777 aa12.2□□□□□ -0.46
SNX29-207ENST00000568949 MRPL47Q9HD33 250 aaKnown RBP12.2□□□□□ -0.46
SNX29-207ENST00000568949 MYO6Q9UM54 1294 aa12.2□□□□□ -0.46
SNX29-207ENST00000568949 ENTPD4Q9Y227 616 aa12.2□□□□□ -0.46
SNX29-207ENST00000568949 WDR37Q9Y2I8 494 aa12.2□□□□□ -0.46
SNX29-207ENST00000568949 TTLL3Q9Y4R7 772 aa12.2□□□□□ -0.46
SNX29-207ENST00000568949 MDC1Q14676 2089 aaKnown RBP12.2□□□□□ -0.46
SNX29-207ENST00000568949 UBA6A0AVT1 1052 aaPredicted RBP12.19□□□□□ -0.46
SNX29-207ENST00000568949 GOLGA6L22H0YM25 854 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 MFSD11O43934 449 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 ZBTB11O95625 1053 aaPredicted RBP12.19□□□□□ -0.46
SNX29-207ENST00000568949 HLA-DQB2P05538 268 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 TCF4P15884 667 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 UBXN1Q04323 297 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 PIGHQ14442 188 aaPredicted RBP12.19□□□□□ -0.46
SNX29-207ENST00000568949 NAA30Q147X3 362 aaPredicted RBP12.19□□□□□ -0.46
SNX29-207ENST00000568949 PAFAH1B3Q15102 231 aaKnown RBP12.19□□□□□ -0.46
SNX29-207ENST00000568949 CRB2Q5IJ48 1285 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 CCDC122Q5T0U0 273 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 TMTC4Q5T4D3 741 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 ALS2CLQ60I27 953 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 IGFL3Q6UXB1 125 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 TMC3Q7Z5M5 1100 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 C11orf96Q7Z7L8 435 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 DSELQ8IZU8 1212 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 ZBTB2Q8N680 514 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 ANKRD20A12PQ8NF67 263 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 CPT1BQ92523 772 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 MARVELD3Q96A59 401 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 TRIM11Q96F44 468 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 SGSM3Q96HU1 749 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 XPO4Q9C0E2 1151 aaKnown RBP12.19□□□□□ -0.46
SNX29-207ENST00000568949 TRIM10Q9UDY6 481 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 LIMA1Q9UHB6 759 aaKnown RBP12.19□□□□□ -0.46
SNX29-207ENST00000568949 FBN2P35556 2912 aa12.19□□□□□ -0.46
SNX29-207ENST00000568949 OR5K3A6NET4 321 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 KLHL41O60662 606 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 MTX2O75431 263 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 MMP2P08253 660 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 MYBL1P10243 752 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 RORAP35398 523 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 CDK18Q07002 472 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 DMPKQ09013 629 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 KRT81Q14533 505 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 PLCL1Q15111 1095 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 GPR19Q15760 415 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 RPE65Q16518 533 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 KHDC1Q4VXA5 237 aaKnown RBP12.18□□□□□ -0.46
SNX29-207ENST00000568949 LYPLAL1Q5VWZ2 237 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 NCBP2-AS2Q69YL0 99 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 TXNRD3NBQ6F5E7 133 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 LCN10Q6JVE6 187 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 GPR150Q8NGU9 434 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 FAM71BQ8TC56 605 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 ZNF653Q96CK0 615 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 IP6K3Q96PC2 410 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 GBP4Q96PP9 640 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 VPS35Q96QK1 796 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 MAGEE1Q9HCI5 957 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 FANCLQ9NW38 375 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 HRASLS2Q9NWW9 162 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 BTRCQ9Y297 605 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 COPG1Q9Y678 874 aaKnown RBP12.18□□□□□ -0.46
SNX29-207ENST00000568949 CROCCQ5TZA2 2017 aa12.18□□□□□ -0.46
SNX29-207ENST00000568949 ZGRF1Q86YA3 2104 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 LRRC10BA6NIK2 292 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 KRT38O76015 456 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 ALPPP05187 535 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 CAPN1P07384 714 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 PRF1P14222 555 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 CD86P42081 329 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 PER3P56645 1201 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 SLC25A11Q02978 314 aaKnown RBP12.17□□□□□ -0.46
SNX29-207ENST00000568949 TMEM115Q12893 351 aaPredicted RBP12.17□□□□□ -0.46
SNX29-207ENST00000568949 MMRN1Q13201 1228 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 ATP1A4Q13733 1029 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 GTF2H3Q13889 308 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 CCDC183Q5T5S1 534 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 FAM198BQ6UWH4 519 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 OOSP2Q86WS3 158 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 RAB43Q86YS6 212 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 TRAPPC5Q8IUR0 188 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 NIPA2Q8N8Q9 360 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 ST6GALNAC3Q8NDV1 305 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 BRSK1Q8TDC3 778 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 UBE2Q2Q8WVN8 375 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 ZFPM2Q8WW38 1151 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 CLIP3Q96DZ5 547 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 ILKAPQ9H0C8 392 aaPredicted RBP12.17□□□□□ -0.46
SNX29-207ENST00000568949 NUP62CLQ9H1M0 184 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 FANCEQ9HB96 536 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 SYTL2Q9HCH5 934 aa12.17□□□□□ -0.46
SNX29-207ENST00000568949 PCMTD2Q9NV79 361 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms