RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	HEBP2	Q9Y5Z4	205 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	COLEC10	Q9Y6Z7	277 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	FAM208B	Q5VWN6	2430 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	PRAMEF33	A0A0G2JMD5	474 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782		A0A0U1RQJ8	604 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	HEATR9	A2RTY3	570 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	GOLGA6L3	A6NEY3	463 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	EFCAB7	A8K855	629 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	QSOX1	O00391	747 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	IFRD1	O00458	451 aa	Predicted RBP	10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	MAP3K7	O43318	606 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	LIAS	O43766	372 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	PRAMEF10	O60809	474 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	RASSF9	O75901	435 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	METTL18	O95568	372 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	EML2	O95834	649 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	ATP1B2	P14415	290 aa	Predicted RBP	10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	HOXB3	P14651	431 aa	Predicted RBP	10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	TPH1	P17752	444 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	MC4R	P32245	332 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	SLC19A1	P41440	591 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	ARL4D	P49703	201 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	RHD	Q02161	417 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	DMPK	Q09013	629 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	PTPRCAP	Q14761	206 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	C16orf72	Q14CZ0	275 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	CCNG2	Q16589	344 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	TAF1B	Q53T94	588 aa	Predicted RBP	10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	ARHGAP40	Q5TG30	622 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	CEACAM20	Q6UY09	585 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	ZNF574	Q6ZN55	896 aa	Predicted RBP	10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	NLRP9	Q7RTR0	991 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	ZNF547	Q8IVP9	402 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	CFAP206	Q8IYR0	622 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	TAB3	Q8N5C8	712 aa	Predicted RBP	10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	IL22RA1	Q8N6P7	574 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	OR13C4	Q8NGS5	318 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	OR2L2	Q8NH16	312 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	C1orf54	Q8WWF1	131 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	ATG4A	Q8WYN0	398 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	ART4	Q93070	314 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	SGF29	Q96ES7	293 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	NAP1L3	Q99457	506 aa	Predicted RBP	10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	CCM2	Q9BSQ5	444 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	TBC1D10A	Q9BXI6	508 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	PRORY	Q9H606	182 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	RAB6B	Q9NRW1	208 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	NLE1	Q9NVX2	485 aa	Predicted RBP	10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	SLC23A2	Q9UGH3	650 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	RALY	Q9UKM9	306 aa	Known RBP	10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	ACSL6	Q9UKU0	697 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	PSMD13	Q9UNM6	376 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	R3HDM2	Q9Y2K5	976 aa	Known RBP	10.18	□□□□□ -0.78
UBR1-207	ENST00000568782	CFAP47	Q6ZTR5	3102 aa		10.18	□□□□□ -0.78
UBR1-207	ENST00000568782		A0A1W2PNU3	283 aa	Predicted RBP	10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	TCRBV7S2A1N4T	A0A589	114 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782		A6NCN8	305 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	OR52A4P	A6NMU1	304 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782		B4E171	279 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	POLR1C	O15160	346 aa	Predicted RBP	10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	TOX3	O15405	576 aa	Predicted RBP	10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	ZSCAN12	O43309	604 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	CEP104	O60308	925 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	FGG	P02679	453 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	APRT	P07741	180 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	GSTM1	P09488	218 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	TYRP1	P17643	537 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	NDUFS1	P28331	727 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	TSPAN7	P41732	249 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	GDF10	P55107	478 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	UBE2I	P63279	158 aa	Known RBP	10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	SARNP	P82979	210 aa	Known RBP	10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	GSTM4	Q03013	218 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	CACNG1	Q06432	222 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	PRKAA1	Q13131	559 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	OLIG2	Q13516	323 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	NFE2L1	Q14494	772 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	KHDC1	Q4VXA5	237 aa	Known RBP	10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	LYPLAL1	Q5VWZ2	237 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	METRNL	Q641Q3	311 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	KCTD11	Q693B1	232 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	IRGC	Q6NXR0	463 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	TMPRSS9	Q7Z410	1059 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	NXPE1	Q8N323	547 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	ZFPM2	Q8WW38	1151 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	RTP4	Q96DX8	246 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	CDKN2AIPNL	Q96HQ2	116 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	C12orf66	Q96MD2	445 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	TGM7	Q96PF1	710 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	GORASP1	Q9BQQ3	440 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	DDA1	Q9BW61	102 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	TSSK1B	Q9BXA7	367 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	GRPEL1	Q9HAV7	217 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	ETNK1	Q9HBU6	452 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	CPNE5	Q9HCH3	593 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	SLC40A1	Q9NP59	571 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	IMP3	Q9NV31	184 aa	Known RBP	10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	ZDHHC3	Q9NYG2	299 aa		10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	ZNF624	Q9P2J8	865 aa	Predicted RBP	10.17	□□□□□ -0.78
UBR1-207	ENST00000568782	PDP2	Q9P2J9	529 aa		10.17	□□□□□ -0.78

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