RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 PANX3Q96QZ0 392 aa14.44□□□□□ -0.1
COMMD4-221ENST00000567935 ATOH8Q96SQ7 321 aa14.44□□□□□ -0.1
COMMD4-221ENST00000567935 HPS4Q9NQG7 708 aa14.44□□□□□ -0.1
COMMD4-221ENST00000567935 LNPEPQ9UIQ6 1025 aa14.44□□□□□ -0.1
COMMD4-221ENST00000567935 TRIM33Q9UPN9 1127 aa14.44□□□□□ -0.1
COMMD4-221ENST00000567935 WASF3Q9UPY6 502 aa14.44□□□□□ -0.1
COMMD4-221ENST00000567935 CAPN7Q9Y6W3 813 aa14.44□□□□□ -0.1
COMMD4-221ENST00000567935 LOC400499M0QZD8 3231 aa14.44□□□□□ -0.1
COMMD4-221ENST00000567935 IGLV3-16A0A075B6K0 115 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 TMEM8BA6NDV4 472 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 TRPC5OSA6NMA1 111 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 ANKRD65E5RJM6 399 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 STX16-NPEPL1H3BU86 382 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 STX16O14662 325 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 NPC1O15118 1278 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 TRIM24O15164 1050 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 HRO43593 1189 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 OR1I1O60431 355 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 MAGEC1O60732 1142 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 NIPSNAP2O75323 286 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 PSMC3P17980 439 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 LHCGRP22888 699 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 ARRB2P32121 409 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 HERVK_113P63132 956 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 PTSQ03393 145 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 PTPRRQ15256 657 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 SPRED3Q2MJR0 410 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 FNDC3BQ53EP0 1204 aaKnown RBP14.43□□□□□ -0.1
COMMD4-221ENST00000567935 SETMARQ53H47 684 aaPredicted RBP14.43□□□□□ -0.1
COMMD4-221ENST00000567935 ARSIQ5FYB1 569 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 TANGO2Q6ICL3 276 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 EPGNQ6UW88 154 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 FRMD7Q6ZUT3 714 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 DSG4Q86SJ6 1040 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 TSPAN33Q86UF1 283 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 NRSN1Q8IZ57 195 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 ZNF781Q8N8C0 355 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 GATA6Q92908 595 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 PTERQ96BW5 349 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 KLHL29Q96CT2 875 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 PPP1R16AQ96I34 528 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 TMEM237Q96Q45 408 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 RAB3IPQ96QF0 476 aaPredicted RBP14.43□□□□□ -0.1
COMMD4-221ENST00000567935 COPS8Q99627 209 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 CCDC28BQ9BUN5 200 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 ERVK-6Q9BXR3 956 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 LRMDAQ9H2I8 198 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 LATS2Q9NRM7 1088 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 PNPOQ9NVS9 261 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 RNF112Q9ULX5 631 aa14.43□□□□□ -0.1
COMMD4-221ENST00000567935 FNDC3AQ9Y2H6 1198 aaKnown RBP14.43□□□□□ -0.1
COMMD4-221ENST00000567935 NBEAQ8NFP9 2946 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 QSOX1O00391 747 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 ZNF195O14628 629 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 KLK8O60259 260 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 FOXD2O60548 495 aaPredicted RBP14.42□□□□□ -0.1
COMMD4-221ENST00000567935 ECI2O75521 394 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 C1SP09871 688 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 CBSLP0DN79 551 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 TIMP2P16035 220 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 CALB2P22676 271 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 DGKAP23743 735 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 ITGB7P26010 798 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 CBSP35520 551 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 IDH3AP50213 366 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 CLCN7P51798 805 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 SATB1Q01826 763 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 ELP6Q0PNE2 266 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 FOXC1Q12948 553 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 ELAVL3Q14576 367 aaKnown RBP14.42□□□□□ -0.1
COMMD4-221ENST00000567935 CCDC6Q16204 474 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 HSF5Q4G112 596 aaPredicted RBP14.42□□□□□ -0.1
COMMD4-221ENST00000567935 SOWAHCQ53LP3 525 aaPredicted RBP14.42□□□□□ -0.1
COMMD4-221ENST00000567935 ZNF678Q5SXM1 525 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 STPG1Q5TH74 334 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 ACAD11Q709F0 780 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 MTSS1LQ765P7 747 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 ASRGL1Q7L266 308 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 ADAMTSL2Q86TH1 951 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 LSMEM2Q8N112 164 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 PHTF2Q8N3S3 785 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 PNPLA1Q8N8W4 532 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 GPR26Q8NDV2 337 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 SORCS1Q8WY21 1168 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 ZCCHC14Q8WYQ9 949 aaKnown RBP14.42□□□□□ -0.1
COMMD4-221ENST00000567935 SGF29Q96ES7 293 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 NSL1Q96IY1 281 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 NELL2Q99435 816 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 KXD1Q9BQD3 176 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 C1QTNF3Q9BXJ4 246 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 CHRDQ9H2X0 955 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 PCDH12Q9NPG4 1184 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 SUN2Q9UH99 717 aa14.42□□□□□ -0.1
COMMD4-221ENST00000567935 GOLGA8QA0A0J9YX86 632 aa14.41□□□□□ -0.1
COMMD4-221ENST00000567935 GOLGA8OA6NCC3 632 aa14.41□□□□□ -0.1
COMMD4-221ENST00000567935 C16orf96A6NNT2 1141 aa14.41□□□□□ -0.1
COMMD4-221ENST00000567935 PRRT4C9JH25 899 aa14.41□□□□□ -0.1
COMMD4-221ENST00000567935 CFAP99D6REC4 459 aa14.41□□□□□ -0.1
COMMD4-221ENST00000567935 GOLGA8NF8WBI6 632 aa14.41□□□□□ -0.1
COMMD4-221ENST00000567935 SLC22A2O15244 555 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms