RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 TBL1YQ9BQ87 522 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 ASPSCR1Q9BZE9 553 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 TSGA10Q9BZW7 698 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 SLC40A1Q9NP59 571 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 OCIAD1Q9NX40 245 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 FOXJ2Q9P0K8 574 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 FEZ2Q9UHY8 353 aaPredicted RBP6.8□□□□□ -1.32
SF3B3-209ENST00000567635 GUCA1BQ9UMX6 200 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 KCTD3Q9Y597 815 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 PCDHB11Q9Y5F2 797 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 ZFHX4Q86UP3 3567 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 LAMA5O15230 3695 aa6.8□□□□□ -1.32
SF3B3-209ENST00000567635 SPTA1P02549 2419 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 TCRBV7S2A1N4TA0A589 114 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 KLHL33A6NCF5 533 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 OR2AG2A6NM03 316 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 EFCAB7A8K855 629 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.79□□□□□ -1.32
SF3B3-209ENST00000567635 STMND1H3BQB6 276 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 ERVH48-1M5A8F1 160 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 EFSO43281 561 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 SRP72O76094 671 aaKnown RBP6.79□□□□□ -1.32
SF3B3-209ENST00000567635 UBXN7O94888 489 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 PRAMEF1O95521 474 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 METTL18O95568 372 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 THRAP10827 490 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 BRAFP15056 766 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 TYRP1P17643 537 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 TPH1P17752 444 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 MSH3P20585 1137 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 AKT1P31749 480 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 STIP1P31948 543 aaKnown RBP6.79□□□□□ -1.32
SF3B3-209ENST00000567635 CA5AP35218 305 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 HADHAP40939 763 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 HALP42357 657 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 XIAPP98170 497 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 MC2RQ01718 297 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 DMPKQ09013 629 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 CLCA4Q14CN2 919 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 SEPT7Q16181 437 aaKnown RBP6.79□□□□□ -1.32
SF3B3-209ENST00000567635 LONRF2Q1L5Z9 754 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 MANEAQ5SRI9 462 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 DCAF12Q5T6F0 453 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 METRNLQ641Q3 311 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 KCTD11Q693B1 232 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 FAM129CQ86XR2 697 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 DTX1Q86Y01 620 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 RBM12BQ8IXT5 1001 aaKnown RBP6.79□□□□□ -1.32
SF3B3-209ENST00000567635 KLHDC8BQ8IXV7 354 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 SLC35B2Q8TB61 432 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 SGF29Q96ES7 293 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 WBP1Q96G27 269 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 DCUN1D1Q96GG9 259 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 TMEM121Q9BTD3 319 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 DDA1Q9BW61 102 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 TBC1D10AQ9BXI6 508 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 ASB8Q9H765 288 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 LRRC40Q9H9A6 602 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 FBXO8Q9NRD0 319 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 POT1Q9NUX5 634 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 SMOXQ9NWM0 555 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 FKBPLQ9UIM3 349 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 PRDM4Q9UKN5 801 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 R3HDM2Q9Y2K5 976 aaKnown RBP6.79□□□□□ -1.32
SF3B3-209ENST00000567635 PCDHGA3Q9Y5H0 932 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 B3GALT1Q9Y5Z6 326 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 SLC30A1Q9Y6M5 507 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 CAPN6Q9Y6Q1 641 aa6.79□□□□□ -1.32
SF3B3-209ENST00000567635 MGAT4DA6NG13 374 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 OR52A4PA6NMU1 304 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 AGAP14A8MT82 685 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 TOX3O15405 576 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-209ENST00000567635 CAPN5O15484 640 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-209ENST00000567635 ARHGAP6O43182 974 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 GPR39O43194 453 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 LDB2O43679 373 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 LIASO43766 372 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 C9P02748 559 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 RALBP11234 206 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 PBLDP30039 288 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-209ENST00000567635 ATP1A2P50993 1020 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 ZNF140P52738 457 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-209ENST00000567635 CTSCP53634 463 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 TERF1P54274 439 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 RAB15P59190 212 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 TMPRSS15P98073 1019 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 C19orf57Q0VDD7 668 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 COL9A2Q14055 689 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-209ENST00000567635 GPR18Q14330 331 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 RPS6KA1Q15418 735 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 RPE65Q16518 533 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 P3H1Q32P28 736 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 GPR33Q49SQ1 333 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 TAF1BQ53T94 588 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-209ENST00000567635 FNBP1LQ5T0N5 605 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 SEL1L2Q5TEA6 688 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 MEI1Q5TIA1 1274 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 CEACAM20Q6UY09 585 aa6.78□□□□□ -1.32
SF3B3-209ENST00000567635 FAM83HQ6ZRV2 1179 aaPredicted RBP6.78□□□□□ -1.32
SF3B3-209ENST00000567635 DET1Q7L5Y6 550 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms