RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 ZNF696Q9H7X3 374 aa22.98■■□□□ 1.27
LINC00543-201ENST00000567234 ZBTB26Q9HCK0 441 aa22.98■■□□□ 1.27
LINC00543-201ENST00000567234 SLCO3A1Q9UIG8 710 aa22.98■■□□□ 1.27
LINC00543-201ENST00000567234 MSRAQ9UJ68 235 aa22.98■■□□□ 1.27
LINC00543-201ENST00000567234 IKZF3Q9UKT9 509 aa22.98■■□□□ 1.27
LINC00543-201ENST00000567234 PIKFYVEQ9Y2I7 2098 aa22.98■■□□□ 1.27
LINC00543-201ENST00000567234 LOC100653049A0A140TA62 436 aa22.98■■□□□ 1.27
LINC00543-201ENST00000567234 RFXAPO00287 272 aa22.98■■□□□ 1.27
LINC00543-201ENST00000567234 KRT34O76011 436 aa22.98■■□□□ 1.27
LINC00543-201ENST00000567234 CDK14O94921 469 aa22.98■■□□□ 1.27
LINC00543-201ENST00000567234 POLR2LP62875 67 aaKnown RBP22.98■■□□□ 1.27
LINC00543-201ENST00000567234 SLC25A3Q00325 362 aa22.98■■□□□ 1.27
LINC00543-201ENST00000567234 ANKS6Q68DC2 871 aa22.98■■□□□ 1.27
LINC00543-201ENST00000567234 PTRHD1Q6GMV3 140 aaKnown RBP22.98■■□□□ 1.27
LINC00543-201ENST00000567234 CROCCP3Q8IVE0 287 aa22.98■■□□□ 1.27
LINC00543-201ENST00000567234 TDHQ8IZJ6 230 aa22.98■■□□□ 1.27
LINC00543-201ENST00000567234 CELF5Q8N6W0 485 aaKnown RBP22.98■■□□□ 1.27
LINC00543-201ENST00000567234 FBXO10Q9UK96 956 aa22.98■■□□□ 1.27
LINC00543-201ENST00000567234 MRPS23Q9Y3D9 190 aaKnown RBP22.98■■□□□ 1.27
LINC00543-201ENST00000567234 HCFC2Q9Y5Z7 792 aa22.98■■□□□ 1.27
LINC00543-201ENST00000567234 NPEPPSL1A6NEC2 478 aa22.97■■□□□ 1.27
LINC00543-201ENST00000567234 MEI4A8MW99 385 aa22.97■■□□□ 1.27
LINC00543-201ENST00000567234 SIX3O95343 332 aaPredicted RBP22.97■■□□□ 1.27
LINC00543-201ENST00000567234 RPS17P08708 135 aaKnown RBP22.97■■□□□ 1.27
LINC00543-201ENST00000567234 CEBPBP17676 345 aa22.97■■□□□ 1.27
LINC00543-201ENST00000567234 POLR2EP19388 210 aaKnown RBP22.97■■□□□ 1.27
LINC00543-201ENST00000567234 SH3BP2P78314 561 aa22.97■■□□□ 1.27
LINC00543-201ENST00000567234 UGT3A2Q3SY77 523 aa22.97■■□□□ 1.27
LINC00543-201ENST00000567234 OGFRL1Q5TC84 451 aaPredicted RBP22.97■■□□□ 1.27
LINC00543-201ENST00000567234 GPSM1Q86YR5 675 aa22.97■■□□□ 1.27
LINC00543-201ENST00000567234 CPNE9Q8IYJ1 553 aa22.97■■□□□ 1.27
LINC00543-201ENST00000567234 ZDHHC6Q9H6R6 413 aa22.97■■□□□ 1.27
LINC00543-201ENST00000567234 SLC28A3Q9HAS3 691 aa22.97■■□□□ 1.27
LINC00543-201ENST00000567234 CRLS1Q9UJA2 301 aa22.97■■□□□ 1.27
LINC00543-201ENST00000567234 ERVW-1Q9UQF0 538 aa22.97■■□□□ 1.27
LINC00543-201ENST00000567234 WNT6Q9Y6F9 365 aa22.97■■□□□ 1.27
LINC00543-201ENST00000567234 GPR39O43194 453 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 PAPLNO95428 1278 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 EEF1DP29692 281 aaKnown RBP22.96■■□□□ 1.27
LINC00543-201ENST00000567234 RECQLP46063 649 aaPredicted RBP22.96■■□□□ 1.27
LINC00543-201ENST00000567234 CLCQ05315 142 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 LCP2Q13094 533 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 DCTN2Q13561 401 aaKnown RBP22.96■■□□□ 1.27
LINC00543-201ENST00000567234 RAB30Q15771 203 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 CHRNA6Q15825 494 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 TMEM198Q66K66 360 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 MACC1Q6ZN28 852 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 TSPAN33Q86UF1 283 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 TRPC4APQ8TEL6 797 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 ASIC4Q96FT7 647 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 BCAP29Q9UHQ4 241 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 COPG1Q9Y678 874 aaKnown RBP22.96■■□□□ 1.27
LINC00543-201ENST00000567234 ANKRD12Q6UB98 2062 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 PLXNB3Q9ULL4 1909 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 SMIM18P0DKX4 95 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 ITGAXP20702 1163 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 CDH13P55290 713 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 CRY1Q16526 586 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 ZNF697Q5TEC3 545 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 LRRC66Q68CR7 880 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 BRAT1Q6PJG6 821 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 GDPD4Q6W3E5 623 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 NXPE1Q8N323 547 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 OR2A12Q8NGT7 310 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 CIPCQ9C0C6 399 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 MID1IP1Q9NPA3 183 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 FIS1Q9Y3D6 152 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 PCDHGA4Q9Y5G9 962 aa22.96■■□□□ 1.27
LINC00543-201ENST00000567234 C15orf38-AP3S2A0A0A6YYH1 394 aa22.95■■□□□ 1.26
LINC00543-201ENST00000567234 AZIN1O14977 448 aa22.95■■□□□ 1.26
LINC00543-201ENST00000567234 BNIP3LO60238 219 aa22.95■■□□□ 1.26
LINC00543-201ENST00000567234 TNFAIP8O95379 198 aa22.95■■□□□ 1.26
LINC00543-201ENST00000567234 CLPTM1O96005 669 aa22.95■■□□□ 1.26
LINC00543-201ENST00000567234 BMP1P13497 986 aa22.95■■□□□ 1.26
LINC00543-201ENST00000567234 BMP8BP34820 402 aa22.95■■□□□ 1.26
LINC00543-201ENST00000567234 NNMTP40261 264 aa22.95■■□□□ 1.26
LINC00543-201ENST00000567234 GRIA2P42262 883 aa22.95■■□□□ 1.26
LINC00543-201ENST00000567234 RGS4P49798 205 aa22.95■■□□□ 1.26
LINC00543-201ENST00000567234 SFT2D3Q587I9 215 aa22.95■■□□□ 1.26
LINC00543-201ENST00000567234 Q6ZVU0 165 aa22.95■■□□□ 1.26
LINC00543-201ENST00000567234 ARPINQ7Z6K5 226 aa22.95■■□□□ 1.26
LINC00543-201ENST00000567234 ADAMTSL2Q86TH1 951 aa22.95■■□□□ 1.26
LINC00543-201ENST00000567234 SNX32Q86XE0 403 aa22.95■■□□□ 1.26
LINC00543-201ENST00000567234 RBM38Q9H0Z9 239 aaKnown RBP22.95■■□□□ 1.26
LINC00543-201ENST00000567234 BRD9Q9H8M2 597 aa22.95■■□□□ 1.26
LINC00543-201ENST00000567234 SARS2Q9NP81 518 aaKnown RBP22.95■■□□□ 1.26
LINC00543-201ENST00000567234 LATS2Q9NRM7 1088 aa22.95■■□□□ 1.26
LINC00543-201ENST00000567234 NUDT4Q9NZJ9 180 aa22.95■■□□□ 1.26
LINC00543-201ENST00000567234 VILLO15195 856 aa22.94■■□□□ 1.26
LINC00543-201ENST00000567234 MLYCDO95822 493 aa22.94■■□□□ 1.26
LINC00543-201ENST00000567234 UGT2B4P06133 528 aa22.94■■□□□ 1.26
LINC00543-201ENST00000567234 IDO1P14902 403 aa22.94■■□□□ 1.26
LINC00543-201ENST00000567234 PTSQ03393 145 aa22.94■■□□□ 1.26
LINC00543-201ENST00000567234 SQLEQ14534 574 aa22.94■■□□□ 1.26
LINC00543-201ENST00000567234 KANK2Q63ZY3 851 aa22.94■■□□□ 1.26
LINC00543-201ENST00000567234 TMEM215Q68D42 235 aa22.94■■□□□ 1.26
LINC00543-201ENST00000567234 LARP4Q71RC2 724 aaKnown RBP eCLIP22.94■■□□□ 1.26
LINC00543-201ENST00000567234 GPR26Q8NDV2 337 aa22.94■■□□□ 1.26
LINC00543-201ENST00000567234 C19orf60Q96EN9 201 aa22.94■■□□□ 1.26
LINC00543-201ENST00000567234 HEPHQ9BQS7 1158 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms