RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 ROPN1Q9HAT0 212 aaPredicted RBP13.25□□□□□ -0.29
CLK3-218ENST00000566926 IL26Q9NPH9 171 aa13.25□□□□□ -0.29
CLK3-218ENST00000566926 NINJ2Q9NZG7 142 aa13.25□□□□□ -0.29
CLK3-218ENST00000566926 SAMD15Q9P1V8 674 aa13.25□□□□□ -0.29
CLK3-218ENST00000566926 AK5Q9Y6K8 562 aa13.25□□□□□ -0.29
CLK3-218ENST00000566926 COL27A1Q8IZC6 1860 aaPredicted RBP13.25□□□□□ -0.29
CLK3-218ENST00000566926 APC2O95996 2303 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 OR5K4A6NMS3 321 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 NTN3O00634 580 aaPredicted RBP13.24□□□□□ -0.29
CLK3-218ENST00000566926 CSO75390 466 aaKnown RBP13.24□□□□□ -0.29
CLK3-218ENST00000566926 CDK14O94921 469 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 ZNF8P17098 575 aaPredicted RBP13.24□□□□□ -0.29
CLK3-218ENST00000566926 VCLP18206 1134 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 PGAM1P18669 254 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 ELK3P41970 407 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 GPR3P46089 330 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 CLCNKAP51800 687 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 FRG1Q14331 258 aaKnown RBP13.24□□□□□ -0.29
CLK3-218ENST00000566926 SLC29A2Q14542 456 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 RTP5Q14D33 572 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 KYNUQ16719 465 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 ISXQ2M1V0 245 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 ATP13A5Q4VNC0 1218 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 ADGRG6Q86SQ4 1221 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 LRRTM4Q86VH4 590 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 MARCH9Q86YJ5 346 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 LSMEM2Q8N112 164 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 AVL9Q8NBF6 648 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 FBXO36Q8NEA4 188 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 OR4K2Q8NGD2 314 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 STAMBPL1Q96FJ0 436 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 C9orf72Q96LT7 481 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 STMN4Q9H169 189 aaPredicted RBP13.24□□□□□ -0.29
CLK3-218ENST00000566926 LRRN3Q9H3W5 708 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 ZC3H7BQ9UGR2 993 aaKnown RBP13.24□□□□□ -0.29
CLK3-218ENST00000566926 ZMIZ1Q9ULJ6 1067 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 PLAAQ9Y263 795 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 ARL5AQ9Y689 179 aa13.24□□□□□ -0.29
CLK3-218ENST00000566926 CHUKO15111 745 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 KCNJ13O60928 360 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 USP12O75317 370 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 SASH3O75995 380 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 ACSL3O95573 720 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 RPLP0P05388 317 aaKnown RBP13.23□□□□□ -0.29
CLK3-218ENST00000566926 POLBP06746 335 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 ACP5P13686 325 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 CCL7P80098 99 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 CYP4F3Q08477 520 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 TMEM115Q12893 351 aaPredicted RBP13.23□□□□□ -0.29
CLK3-218ENST00000566926 RASA2Q15283 850 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 CHRNA6Q15825 494 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 CLPPQ16740 277 aaPredicted RBP13.23□□□□□ -0.29
CLK3-218ENST00000566926 INSCQ1MX18 579 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 KLHL38Q2WGJ6 581 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 MSS51Q4VC12 460 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 DENND5AQ6IQ26 1287 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 FAM151BQ6UXP7 276 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 NLRP9Q7RTR0 991 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 PROSER1Q86XN7 944 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 NAGSQ8N159 534 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 RIBC1Q8N443 379 aaPredicted RBP13.23□□□□□ -0.29
CLK3-218ENST00000566926 ARL14Q8N4G2 192 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 ZNF398Q8TD17 642 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 PEX13Q92968 403 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 SIGLEC10Q96LC7 697 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 PWWP2AQ96N64 755 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 TMEM74Q96NL1 305 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 ZIM3Q96PE6 472 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 TIMM29Q9BSF4 260 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 EPB41L4BQ9H329 900 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 MRM3Q9HC36 420 aaKnown RBP13.23□□□□□ -0.29
CLK3-218ENST00000566926 LRRC4CQ9HCJ2 640 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 SMOXQ9NWM0 555 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 PLEKHM1Q9Y4G2 1056 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 MAD1L1Q9Y6D9 718 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 RNF215Q9Y6U7 377 aa13.23□□□□□ -0.29
CLK3-218ENST00000566926 FRYQ5TBA9 3013 aa13.22□□□□□ -0.29
CLK3-218ENST00000566926 ANKRD11Q6UB99 2663 aaPredicted RBP13.22□□□□□ -0.29
CLK3-218ENST00000566926 KIR2DS5A0A0G2JLQ3 304 aa13.22□□□□□ -0.29
CLK3-218ENST00000566926 A0A0G2JNG1 304 aa13.22□□□□□ -0.29
CLK3-218ENST00000566926 FAM237BA0A1B0GVD1 139 aa13.22□□□□□ -0.29
CLK3-218ENST00000566926 KIR2DS3K7RE56 304 aa13.22□□□□□ -0.29
CLK3-218ENST00000566926 BUD23O43709 281 aaKnown RBP13.22□□□□□ -0.29
CLK3-218ENST00000566926 AVILO75366 819 aa13.22□□□□□ -0.29
CLK3-218ENST00000566926 CAPNS1P04632 268 aa13.22□□□□□ -0.29
CLK3-218ENST00000566926 MYZAPP0CAP1 466 aa13.22□□□□□ -0.29
CLK3-218ENST00000566926 ZNF7P17097 686 aaPredicted RBP13.22□□□□□ -0.29
CLK3-218ENST00000566926 ATP5DP30049 168 aa13.22□□□□□ -0.29
CLK3-218ENST00000566926 FASLGP48023 281 aa13.22□□□□□ -0.29
CLK3-218ENST00000566926 MAZP56270 477 aaKnown RBP13.22□□□□□ -0.29
CLK3-218ENST00000566926 SESN2P58004 480 aaPredicted RBP13.22□□□□□ -0.29
CLK3-218ENST00000566926 SPARCL1Q14515 664 aa13.22□□□□□ -0.29
CLK3-218ENST00000566926 KIR2DS5Q14953 304 aa13.22□□□□□ -0.29
CLK3-218ENST00000566926 NR1D2Q14995 579 aa13.22□□□□□ -0.29
CLK3-218ENST00000566926 SPANXN3Q5MJ09 141 aa13.22□□□□□ -0.29
CLK3-218ENST00000566926 STEAP4Q687X5 459 aa13.22□□□□□ -0.29
CLK3-218ENST00000566926 CASC4Q6P4E1 433 aa13.22□□□□□ -0.29
CLK3-218ENST00000566926 C3orf62Q6ZUJ4 267 aa13.22□□□□□ -0.29
CLK3-218ENST00000566926 ZNF438Q7Z4V0 828 aa13.22□□□□□ -0.29
CLK3-218ENST00000566926 SPRED1Q7Z699 444 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms