RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 AMZ2Q86W34 360 aa17.97■□□□□ 0.47
USB1-213ENST00000566292 RBM12BQ8IXT5 1001 aaKnown RBP17.97■□□□□ 0.47
USB1-213ENST00000566292 UNC5BQ8IZJ1 945 aa17.97■□□□□ 0.47
USB1-213ENST00000566292 GPR150Q8NGU9 434 aa17.97■□□□□ 0.47
USB1-213ENST00000566292 CXorf40BQ96DE9 158 aa17.97■□□□□ 0.47
USB1-213ENST00000566292 SLC45A3Q96JT2 553 aa17.97■□□□□ 0.47
USB1-213ENST00000566292 FAM118BQ9BPY3 351 aa17.97■□□□□ 0.47
USB1-213ENST00000566292 OSBPL8Q9BZF1 889 aa17.97■□□□□ 0.47
USB1-213ENST00000566292 ZCCHC2Q9C0B9 1178 aaKnown RBP17.97■□□□□ 0.47
USB1-213ENST00000566292 SMOXQ9NWM0 555 aa17.97■□□□□ 0.47
USB1-213ENST00000566292 ZNF891A8MT65 544 aaPredicted RBP17.96■□□□□ 0.47
USB1-213ENST00000566292 STX7O15400 261 aaKnown RBP17.96■□□□□ 0.47
USB1-213ENST00000566292 TOX3O15405 576 aaPredicted RBP17.96■□□□□ 0.47
USB1-213ENST00000566292 KIF1CO43896 1103 aaKnown RBP17.96■□□□□ 0.47
USB1-213ENST00000566292 PPFIA2O75334 1257 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 ANXA9O76027 345 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 ZNF28P17035 718 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 CTNNA2P26232 953 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 PSMB4P28070 264 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 PTPN7P35236 360 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 SEPHS1P49903 392 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 SH3BP2P78314 561 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 NFKB2Q00653 900 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 FOXM1Q08050 763 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 ABHD18Q0P651 414 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 NFE2L1Q14494 772 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 ANKRD20A2Q5SQ80 823 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 CCDC181Q5TID7 509 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 ANKRD20A1Q5TYW2 823 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 ANKRD20A3Q5VUR7 823 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 ITPRIPL1Q6GPH6 555 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 AADACL2Q6P093 401 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 RANBP10Q6VN20 620 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 RAD9BQ6WBX8 426 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 ZNF398Q8TD17 642 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 RNF31Q96EP0 1072 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 APOL2Q9BQE5 337 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 LACRTQ9GZZ8 138 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 ZNF768Q9H5H4 540 aaKnown RBP17.96■□□□□ 0.47
USB1-213ENST00000566292 GPN2Q9H9Y4 310 aaPredicted RBP17.96■□□□□ 0.47
USB1-213ENST00000566292 IL17BQ9UHF5 180 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 PSMD13Q9UNM6 376 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 EFR3BQ9Y2G0 817 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 KCTD3Q9Y597 815 aa17.96■□□□□ 0.47
USB1-213ENST00000566292 MACROD2A1Z1Q3 448 aa17.95■□□□□ 0.46
USB1-213ENST00000566292 BTNL10A8MVZ5 291 aa17.95■□□□□ 0.46
USB1-213ENST00000566292 NKX2-8O15522 239 aa17.95■□□□□ 0.46
USB1-213ENST00000566292 PRAMEF1O95521 474 aa17.95■□□□□ 0.46
USB1-213ENST00000566292 RBP3P10745 1247 aa17.95■□□□□ 0.46
USB1-213ENST00000566292 LPOP22079 712 aaPredicted RBP17.95■□□□□ 0.46
USB1-213ENST00000566292 HALP42357 657 aa17.95■□□□□ 0.46
USB1-213ENST00000566292 EIF3EP60228 445 aaKnown RBP17.95■□□□□ 0.46
USB1-213ENST00000566292 PPP1CAP62136 330 aa17.95■□□□□ 0.46
USB1-213ENST00000566292 MSLNQ13421 630 aaPredicted RBP17.95■□□□□ 0.46
USB1-213ENST00000566292 TAF1AQ15573 450 aaPredicted RBP17.95■□□□□ 0.46
USB1-213ENST00000566292 RPE65Q16518 533 aa17.95■□□□□ 0.46
USB1-213ENST00000566292 BORAQ6PGQ7 559 aa17.95■□□□□ 0.46
USB1-213ENST00000566292 PRICKLE2Q7Z3G6 844 aa17.95■□□□□ 0.46
USB1-213ENST00000566292 PRSS42Q7Z5A4 293 aa17.95■□□□□ 0.46
USB1-213ENST00000566292 TMTC1Q8IUR5 882 aa17.95■□□□□ 0.46
USB1-213ENST00000566292 CDKL3Q8IVW4 592 aaPredicted RBP17.95■□□□□ 0.46
USB1-213ENST00000566292 BEND7Q8N7W2 519 aaPredicted RBP17.95■□□□□ 0.46
USB1-213ENST00000566292 OR4K2Q8NGD2 314 aa17.95■□□□□ 0.46
USB1-213ENST00000566292 NAT14Q8WUY8 206 aa17.95■□□□□ 0.46
USB1-213ENST00000566292 ALG3Q92685 438 aa17.95■□□□□ 0.46
USB1-213ENST00000566292 MRFAP1L1Q96HT8 127 aa17.95■□□□□ 0.46
USB1-213ENST00000566292 FAM117AQ9C073 453 aa17.95■□□□□ 0.46
USB1-213ENST00000566292 GEMIN8Q9NWZ8 242 aaKnown RBP17.95■□□□□ 0.46
USB1-213ENST00000566292 EPHA6Q9UF33 1036 aa17.95■□□□□ 0.46
USB1-213ENST00000566292 DNMT3AQ9Y6K1 912 aaPredicted RBP17.95■□□□□ 0.46
USB1-213ENST00000566292 KCNN4O15554 427 aa17.94■□□□□ 0.46
USB1-213ENST00000566292 RASSF9O75901 435 aa17.94■□□□□ 0.46
USB1-213ENST00000566292 SFTPCP11686 197 aa17.94■□□□□ 0.46
USB1-213ENST00000566292 PBLDP30039 288 aaPredicted RBP17.94■□□□□ 0.46
USB1-213ENST00000566292 MAP7Q14244 749 aa17.94■□□□□ 0.46
USB1-213ENST00000566292 FNBP1LQ5T0N5 605 aa17.94■□□□□ 0.46
USB1-213ENST00000566292 CACHD1Q5VU97 1274 aa17.94■□□□□ 0.46
USB1-213ENST00000566292 IRGCQ6NXR0 463 aa17.94■□□□□ 0.46
USB1-213ENST00000566292 DARS2Q6PI48 645 aaKnown RBP17.94■□□□□ 0.46
USB1-213ENST00000566292 FAM92BQ6ZTR7 304 aa17.94■□□□□ 0.46
USB1-213ENST00000566292 DET1Q7L5Y6 550 aa17.94■□□□□ 0.46
USB1-213ENST00000566292 LRRC57Q8N9N7 239 aa17.94■□□□□ 0.46
USB1-213ENST00000566292 ACRBPQ8NEB7 543 aa17.94■□□□□ 0.46
USB1-213ENST00000566292 CCDC110Q8TBZ0 833 aa17.94■□□□□ 0.46
USB1-213ENST00000566292 KLHL6Q8WZ60 621 aa17.94■□□□□ 0.46
USB1-213ENST00000566292 KIAA1143Q96AT1 154 aaPredicted RBP17.94■□□□□ 0.46
USB1-213ENST00000566292 CALR3Q96L12 384 aaKnown RBP17.94■□□□□ 0.46
USB1-213ENST00000566292 OR6C1Q96RD1 312 aa17.94■□□□□ 0.46
USB1-213ENST00000566292 RAB33BQ9H082 229 aa17.94■□□□□ 0.46
USB1-213ENST00000566292 RBSNQ9H1K0 784 aa17.94■□□□□ 0.46
USB1-213ENST00000566292 TRIT1Q9H3H1 467 aaKnown RBP17.94■□□□□ 0.46
USB1-213ENST00000566292 FKBPLQ9UIM3 349 aa17.94■□□□□ 0.46
USB1-213ENST00000566292 CCDC66A2RUB6 948 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 GRID2IPA4D2P6 1211 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 C2orf81A6NN90 581 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 SRP72O76094 671 aaKnown RBP17.93■□□□□ 0.46
USB1-213ENST00000566292 PRKAR1AP10644 381 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 PYGMP11217 842 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 MSH3P20585 1137 aa17.93■□□□□ 0.46
USB1-213ENST00000566292 F8A1P23610 371 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms