RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 TRABDQ9H4I3 376 aa18.44■□□□□ 0.54
ABCA3-204ENST00000566200 PSMD13Q9UNM6 376 aa18.44■□□□□ 0.54
ABCA3-204ENST00000566200 KCTD3Q9Y597 815 aa18.44■□□□□ 0.54
ABCA3-204ENST00000566200 CLEC18AA5D8T8 446 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 MFAP3LO75121 409 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 POP7O75817 140 aaKnown RBP18.43■□□□□ 0.54
ABCA3-204ENST00000566200 EPOP01588 193 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 FOLR1P15328 257 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 SPAM1P38567 509 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 GTF2H3Q13889 308 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 NFE2L1Q14494 772 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 KCNAB1Q14722 419 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.43■□□□□ 0.54
ABCA3-204ENST00000566200 CLEC18BQ6UXF7 455 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 FAM151BQ6UXP7 276 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 CERS6Q6ZMG9 384 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 SPOCD1Q6ZMY3 1216 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 AMZ2Q86W34 360 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 ZNF567Q8N184 647 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 CLEC18CQ8NCF0 446 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 DDHD1Q8NEL9 900 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 BRSK1Q8TDC3 778 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 FCRL5Q96RD9 977 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 RUFY1Q96T51 708 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 GOLPH3Q9H4A6 298 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 AKIRIN1Q9H9L7 192 aaPredicted RBP18.43■□□□□ 0.54
ABCA3-204ENST00000566200 ZNHIT6Q9NWK9 470 aaKnown RBP18.43■□□□□ 0.54
ABCA3-204ENST00000566200 LNPEPQ9UIQ6 1025 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 PCDHGA6Q9Y5G7 932 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 DOPEY2Q9Y3R5 2298 aa18.43■□□□□ 0.54
ABCA3-204ENST00000566200 KCNJ13O60928 360 aa18.42■□□□□ 0.54
ABCA3-204ENST00000566200 KATNA1O75449 491 aa18.42■□□□□ 0.54
ABCA3-204ENST00000566200 TPM3P06753 285 aa18.42■□□□□ 0.54
ABCA3-204ENST00000566200 VCLP18206 1134 aa18.42■□□□□ 0.54
ABCA3-204ENST00000566200 HALP42357 657 aa18.42■□□□□ 0.54
ABCA3-204ENST00000566200 DNASE1L3Q13609 305 aa18.42■□□□□ 0.54
ABCA3-204ENST00000566200 SEPT6Q14141 434 aa18.42■□□□□ 0.54
ABCA3-204ENST00000566200 PTPRCAPQ14761 206 aa18.42■□□□□ 0.54
ABCA3-204ENST00000566200 SLC1A5Q15758 541 aa18.42■□□□□ 0.54
ABCA3-204ENST00000566200 GPRC6AQ5T6X5 926 aa18.42■□□□□ 0.54
ABCA3-204ENST00000566200 KAZNQ674X7 775 aa18.42■□□□□ 0.54
ABCA3-204ENST00000566200 PWWP2BQ6NUJ5 590 aa18.42■□□□□ 0.54
ABCA3-204ENST00000566200 PPP1R3BQ86XI6 285 aa18.42■□□□□ 0.54
ABCA3-204ENST00000566200 VSTM4Q8IW00 320 aa18.42■□□□□ 0.54
ABCA3-204ENST00000566200 BLOC1S5Q8TDH9 187 aa18.42■□□□□ 0.54
ABCA3-204ENST00000566200 CT55Q8WUE5 264 aa18.42■□□□□ 0.54
ABCA3-204ENST00000566200 CCDC42Q96M95 316 aa18.42■□□□□ 0.54
ABCA3-204ENST00000566200 GORASP1Q9BQQ3 440 aa18.42■□□□□ 0.54
ABCA3-204ENST00000566200 PCDHB3Q9Y5E6 796 aa18.42■□□□□ 0.54
ABCA3-204ENST00000566200 GLYATL1P3A0A0U1RQE8 302 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 OR2AG2A6NM03 316 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 CREG1O75629 220 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 TUBB3Q13509 450 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 TFDP2Q14188 446 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 ODF2Q5BJF6 829 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 LDLRAP1Q5SW96 308 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 ZDHHC20Q5W0Z9 365 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 DUS1LQ6P1R4 473 aaKnown RBP18.41■□□□□ 0.54
ABCA3-204ENST00000566200 TMEM220Q6QAJ8 160 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 BZW1Q7L1Q6 419 aaKnown RBP18.41■□□□□ 0.54
ABCA3-204ENST00000566200 GLT6D1Q7Z4J2 308 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 ZC3H18Q86VM9 953 aaKnown RBP18.41■□□□□ 0.54
ABCA3-204ENST00000566200 IPMKQ8NFU5 416 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 NAT14Q8WUY8 206 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 TTC25Q96NG3 672 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 MAP3K3Q99759 626 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 LHX9Q9NQ69 397 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 SMOXQ9NWM0 555 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 KLHL8Q9P2G9 620 aaPredicted RBP18.41■□□□□ 0.54
ABCA3-204ENST00000566200 ANKMY1Q9P2S6 941 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 PADI1Q9ULC6 663 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 POLHQ9Y253 713 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 PLAAQ9Y263 795 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 CFAP20Q9Y6A4 193 aaKnown RBP18.41■□□□□ 0.54
ABCA3-204ENST00000566200 NAV2Q8IVL1 2488 aa18.41■□□□□ 0.54
ABCA3-204ENST00000566200 hCG_1818297A0A087WSY0 165 aa18.4■□□□□ 0.54
ABCA3-204ENST00000566200 CDC14CA4D256 554 aa18.4■□□□□ 0.54
ABCA3-204ENST00000566200 PSTPIP1O43586 416 aa18.4■□□□□ 0.54
ABCA3-204ENST00000566200 SPOPO43791 374 aa18.4■□□□□ 0.54
ABCA3-204ENST00000566200 PDGFAP04085 211 aa18.4■□□□□ 0.54
ABCA3-204ENST00000566200 EBLN1P0CF75 366 aa18.4■□□□□ 0.54
ABCA3-204ENST00000566200 MARCKSL1P49006 195 aa18.4■□□□□ 0.54
ABCA3-204ENST00000566200 UBAP2LQ14157 1087 aaKnown RBP18.4■□□□□ 0.54
ABCA3-204ENST00000566200 PPP2R5EQ16537 467 aa18.4■□□□□ 0.54
ABCA3-204ENST00000566200 PID1Q7Z2X4 250 aa18.4■□□□□ 0.54
ABCA3-204ENST00000566200 BEND7Q8N7W2 519 aaPredicted RBP18.4■□□□□ 0.54
ABCA3-204ENST00000566200 SIDT2Q8NBJ9 832 aaKnown RBP18.4■□□□□ 0.54
ABCA3-204ENST00000566200 UBXN4Q92575 508 aa18.4■□□□□ 0.54
ABCA3-204ENST00000566200 P3H4Q92791 437 aa18.4■□□□□ 0.54
ABCA3-204ENST00000566200 HAUS1Q96CS2 278 aa18.4■□□□□ 0.54
ABCA3-204ENST00000566200 QKIQ96PU8 341 aaKnown RBP eCLIP18.4■□□□□ 0.54
ABCA3-204ENST00000566200 HACD3Q9P035 362 aa18.4■□□□□ 0.54
ABCA3-204ENST00000566200 KCND3Q9UK17 655 aa18.4■□□□□ 0.54
ABCA3-204ENST00000566200 INTUQ9ULD6 942 aa18.4■□□□□ 0.54
ABCA3-204ENST00000566200 TNRC6AQ8NDV7 1962 aaKnown RBP18.39■□□□□ 0.53
ABCA3-204ENST00000566200 MTSS1O43312 755 aa18.39■□□□□ 0.53
ABCA3-204ENST00000566200 CBFA2T2O43439 604 aa18.39■□□□□ 0.53
ABCA3-204ENST00000566200 CCNYL3P0C7X3 344 aa18.39■□□□□ 0.53
ABCA3-204ENST00000566200 MTHFD1P11586 935 aaKnown RBP18.39■□□□□ 0.53
ABCA3-204ENST00000566200 HLA-DPA1P20036 260 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms