RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 RAPGEFL1Q9UHV5 662 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 FBXO5Q9UKT4 447 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.45□□□□□ -0.42
SF3B3-206ENST00000565990 GPR179Q6PRD1 2367 aa12.45□□□□□ -0.42
SF3B3-206ENST00000565990 ZNF292O60281 2723 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 CABIN1Q9Y6J0 2220 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 PRSS38A1L453 326 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 FAM159BA6NKW6 160 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 FOXD2O60548 495 aaPredicted RBP12.44□□□□□ -0.42
SF3B3-206ENST00000565990 MTX2O75431 263 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 AP2A2O94973 939 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 TNFP01375 233 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 AHSGP02765 367 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 ZNF883P0CG24 379 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 RALBP11234 206 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 NME1P15531 152 aaKnown RBP12.44□□□□□ -0.42
SF3B3-206ENST00000565990 ENGP17813 658 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 RPS3P23396 243 aaKnown RBP eCLIP12.44□□□□□ -0.423e-7■■■□□ 15.6
SF3B3-206ENST00000565990 GABRB3P28472 473 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 SKIV2L2P42285 1042 aaKnown RBP12.44□□□□□ -0.42
SF3B3-206ENST00000565990 NSG1P42857 185 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 BLKP51451 505 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 SPEM2Q0P670 501 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 CTBP1Q13363 440 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 RIPK1Q13546 671 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 THOC5Q13769 683 aaKnown RBP12.44□□□□□ -0.42
SF3B3-206ENST00000565990 CCDC6Q16204 474 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 DBX2Q6ZNG2 339 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 KIAA0408Q6ZU52 694 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 LDB1Q86U70 411 aaPredicted RBP12.44□□□□□ -0.42
SF3B3-206ENST00000565990 OXR1Q8N573 874 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 GABPB2Q8TAK5 448 aaPredicted RBP12.44□□□□□ -0.42
SF3B3-206ENST00000565990 GDAP1Q8TB36 358 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 CKAP2Q8WWK9 683 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 LPGAT1Q92604 370 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.44□□□□□ -0.42
SF3B3-206ENST00000565990 TSACCQ96A04 125 aaPredicted RBP12.44□□□□□ -0.42
SF3B3-206ENST00000565990 CCDC97Q96F63 343 aaPredicted RBP12.44□□□□□ -0.42
SF3B3-206ENST00000565990 LINC00615Q96LM1 132 aaPredicted RBP12.44□□□□□ -0.42
SF3B3-206ENST00000565990 BIRC8Q96P09 236 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 ELF4Q99607 663 aaPredicted RBP12.44□□□□□ -0.42
SF3B3-206ENST00000565990 FAM167BQ9BTA0 163 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 BOCQ9BWV1 1114 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 ZCCHC2Q9C0B9 1178 aaKnown RBP12.44□□□□□ -0.42
SF3B3-206ENST00000565990 SMOC1Q9H4F8 434 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 PARD6AQ9NPB6 346 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 SMYD2Q9NRG4 433 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 IARS2Q9NSE4 1012 aaKnown RBP12.44□□□□□ -0.42
SF3B3-206ENST00000565990 KLC4Q9NSK0 619 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 TRNAU1APQ9NX07 287 aaKnown RBP12.44□□□□□ -0.42
SF3B3-206ENST00000565990 KLQ9UEF7 1012 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 RABGEF1Q9UJ41 708 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 SUFUQ9UMX1 484 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 VPS9D1Q9Y2B5 631 aa12.44□□□□□ -0.42
SF3B3-206ENST00000565990 PCYT1BQ9Y5K3 369 aaPredicted RBP12.44□□□□□ -0.42
SF3B3-206ENST00000565990 A0A1B0GTQ1 180 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 C17orf113A0A1B0GUU1 675 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 TLDC2A0PJX2 215 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 CFAP99D6REC4 459 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 CDX4O14627 284 aaPredicted RBP12.43□□□□□ -0.42
SF3B3-206ENST00000565990 PFDN6O15212 129 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 KMOO15229 486 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 GRID2O43424 1007 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 OR1I1O60431 355 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 KCNJ13O60928 360 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 NDUFS3O75489 264 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 HAUS5O94927 633 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 RASGRP1O95267 797 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 ASMTLO95671 621 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 ZNF7P17097 686 aaPredicted RBP12.43□□□□□ -0.42
SF3B3-206ENST00000565990 MSH3P20585 1137 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 SCTRP47872 440 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 ARRB1P49407 418 aaPredicted RBP12.43□□□□□ -0.42
SF3B3-206ENST00000565990 CLCNKAP51800 687 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 BCL7AQ4VC05 210 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 ZNF789Q5FWF6 425 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 SPDYAQ5MJ70 313 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 PRAMEF14Q5SWL7 426 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 UBAP2Q5T6F2 1119 aaKnown RBP12.43□□□□□ -0.42
SF3B3-206ENST00000565990 ZNF470Q6ECI4 717 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 TMEM220Q6QAJ8 160 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 RGS9BPQ6ZS82 235 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 ASCL5Q7RTU5 278 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 KANSL1Q7Z3B3 1105 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 C11orf96Q7Z7L8 435 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 EXOC3L1Q86VI1 746 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 SLC26A11Q86WA9 606 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 LRRC6Q86X45 466 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 DENND6AQ8IWF6 608 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 RBFAQ8N0V3 343 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 SDR16C5Q8N3Y7 309 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 GPBAR1Q8TDU6 330 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 SGF29Q96ES7 293 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 DCUN1D1Q96GG9 259 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 GAREM1Q9H706 876 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 CYP4F12Q9HCS2 524 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 SSU72Q9NP77 194 aaKnown RBP12.43□□□□□ -0.42
SF3B3-206ENST00000565990 FSCN3Q9NQT6 498 aa12.43□□□□□ -0.42
SF3B3-206ENST00000565990 DNAAF2Q9NVR5 837 aaKnown RBP12.43□□□□□ -0.42
SF3B3-206ENST00000565990 NCDNQ9UBB6 729 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms