RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 AMZ2Q86W34 360 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 GALNT11Q8NCW6 608 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 SPATA22Q8NHS9 363 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 GDAP1Q8TB36 358 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 CPT1CQ8TCG5 803 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 DTX3LQ8TDB6 740 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 CPLX3Q8WVH0 158 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 TTC25Q96NG3 672 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 RUFY1Q96T51 708 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 CD180Q99467 661 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 ZCCHC2Q9C0B9 1178 aaKnown RBP13.8□□□□□ -0.2
CDR2-204ENST00000564542 BPIFA1Q9NP55 256 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 FGF21Q9NSA1 209 aa13.8□□□□□ -0.2
CDR2-204ENST00000564542 LUC7L2Q9Y383 392 aaKnown RBP13.8□□□□□ -0.2
CDR2-204ENST00000564542 PCDHGA9Q9Y5G4 932 aaKnown RBP13.8□□□□□ -0.2
CDR2-204ENST00000564542 A0A0A6YYK5 440 aaPredicted RBP13.79□□□□□ -0.2
CDR2-204ENST00000564542 TLCD2A6NGC4 264 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 C3orf70A6NLC5 250 aaPredicted RBP13.79□□□□□ -0.2
CDR2-204ENST00000564542 CPNE3O75131 537 aaKnown RBP13.79□□□□□ -0.2
CDR2-204ENST00000564542 PMPCBO75439 489 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 AGFG2O95081 481 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 GYPCP04921 128 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 GNLYP22749 145 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 ANP32AP39687 249 aaKnown RBP13.79□□□□□ -0.2
CDR2-204ENST00000564542 ARL4DP49703 201 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 RPS18P62269 152 aaKnown RBP13.79□□□□□ -0.2
CDR2-204ENST00000564542 RPS15P62841 145 aaKnown RBP13.79□□□□□ -0.2
CDR2-204ENST00000564542 HSD11B2P80365 405 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 FANCCQ00597 558 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 IL10RAQ13651 578 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 PLCL1Q15111 1095 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 RPE65Q16518 533 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 DNTTIP2Q5QJE6 756 aaKnown RBP13.79□□□□□ -0.2
CDR2-204ENST00000564542 FHL5Q5TD97 284 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 CPZQ66K79 652 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 FAM199XQ6PEV8 388 aaPredicted RBP13.79□□□□□ -0.2
CDR2-204ENST00000564542 NPNTQ6UXI9 565 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 MAP3K3Q99759 626 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 SLC25A23Q9BV35 468 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 MAK16Q9BXY0 300 aaKnown RBP13.79□□□□□ -0.2
CDR2-204ENST00000564542 PACSIN1Q9BY11 444 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 TRABDQ9H4I3 376 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 AKIRIN1Q9H9L7 192 aaPredicted RBP13.79□□□□□ -0.2
CDR2-204ENST00000564542 GLOD4Q9HC38 313 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 MLXIPLQ9NP71 852 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 IL26Q9NPH9 171 aa13.79□□□□□ -0.2
CDR2-204ENST00000564542 TNRC6AQ8NDV7 1962 aaKnown RBP13.79□□□□□ -0.2
CDR2-204ENST00000564542 OR5K3A6NET4 321 aa13.78□□□□□ -0.2
CDR2-204ENST00000564542 POP7O75817 140 aaKnown RBP13.78□□□□□ -0.2
CDR2-204ENST00000564542 SORBS2O94875 1100 aaKnown RBP13.78□□□□□ -0.2
CDR2-204ENST00000564542 ZFXP17010 805 aaPredicted RBP13.78□□□□□ -0.2
CDR2-204ENST00000564542 SPAM1P38567 509 aa13.78□□□□□ -0.2
CDR2-204ENST00000564542 CTSCP53634 463 aa13.78□□□□□ -0.2
CDR2-204ENST00000564542 UBASH3AP57075 661 aa13.78□□□□□ -0.2
CDR2-204ENST00000564542 TPM4P67936 248 aa13.78□□□□□ -0.2
CDR2-204ENST00000564542 TUBB4BP68371 445 aa13.78□□□□□ -0.2
CDR2-204ENST00000564542 PDE1BQ01064 536 aa13.78□□□□□ -0.2
CDR2-204ENST00000564542 TUBB2AQ13885 445 aa13.78□□□□□ -0.2
CDR2-204ENST00000564542 SLC18A3Q16572 532 aa13.78□□□□□ -0.2
CDR2-204ENST00000564542 TEX44Q53QW1 395 aa13.78□□□□□ -0.2
CDR2-204ENST00000564542 LDLRAP1Q5SW96 308 aa13.78□□□□□ -0.2
CDR2-204ENST00000564542 PAPD7Q5XG87 772 aaKnown RBP13.78□□□□□ -0.2
CDR2-204ENST00000564542 CERS6Q6ZMG9 384 aa13.78□□□□□ -0.2
CDR2-204ENST00000564542 FAM83HQ6ZRV2 1179 aaPredicted RBP13.78□□□□□ -0.2
CDR2-204ENST00000564542 D2HGDHQ8N465 521 aa13.78□□□□□ -0.2
CDR2-204ENST00000564542 RASGEF1AQ8N9B8 481 aa13.78□□□□□ -0.2
CDR2-204ENST00000564542 DDHD1Q8NEL9 900 aa13.78□□□□□ -0.2
CDR2-204ENST00000564542 TUBB2BQ9BVA1 445 aa13.78□□□□□ -0.2
CDR2-204ENST00000564542 ACSS2Q9NR19 701 aa13.78□□□□□ -0.2
CDR2-204ENST00000564542 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.78□□□□□ -0.2
CDR2-204ENST00000564542 PLEKHB1Q9UF11 243 aaPredicted RBP13.78□□□□□ -0.2
CDR2-204ENST00000564542 PSMD13Q9UNM6 376 aa13.78□□□□□ -0.2
CDR2-204ENST00000564542 PRRC2CQ9Y520 2896 aaKnown RBP13.78□□□□□ -0.2
CDR2-204ENST00000564542 LOC285095A0A1B0GVY8 99 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 UBA6A0AVT1 1052 aaPredicted RBP13.77□□□□□ -0.21
CDR2-204ENST00000564542 ARGFXA6NJG6 315 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 GPR39O43194 453 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 SCRG1O75711 98 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 TMEM253P0C7T8 217 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 MTHFD1P11586 935 aaKnown RBP13.77□□□□□ -0.21
CDR2-204ENST00000564542 PTPN3P26045 913 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 HNRNPH3P31942 346 aaKnown RBP13.77□□□□□ -0.21
CDR2-204ENST00000564542 CHAF1BQ13112 559 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 NFE2L1Q14494 772 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 MESDQ14696 234 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 PRKD1Q15139 912 aaPredicted RBP13.77□□□□□ -0.21
CDR2-204ENST00000564542 NADK2Q4G0N4 442 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 IZUMO3Q5VZ72 239 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 FAM151BQ6UXP7 276 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 ZNF517Q6ZMY9 492 aaPredicted RBP13.77□□□□□ -0.21
CDR2-204ENST00000564542 OOSP2Q86WS3 158 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 TMEM126BQ8IUX1 230 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 CARFQ8N187 725 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 TTC30BQ8N4P2 665 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 OR8K5Q8NH50 307 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 SSC4DQ8WTU2 575 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 TEKT5Q96M29 485 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 ING2Q9H160 280 aa13.77□□□□□ -0.21
CDR2-204ENST00000564542 IMP3Q9NV31 184 aaKnown RBP13.77□□□□□ -0.21
CDR2-204ENST00000564542 SMOXQ9NWM0 555 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms