RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 RNF25Q96BH1 459 aaPredicted RBP20.47■□□□□ 0.87
HERC2-204ENST00000563945 PACSIN1Q9BY11 444 aa20.47■□□□□ 0.87
HERC2-204ENST00000563945 ACTL8Q9H568 366 aa20.47■□□□□ 0.87
HERC2-204ENST00000563945 ZNHIT6Q9NWK9 470 aaKnown RBP20.47■□□□□ 0.87
HERC2-204ENST00000563945 FAM153AQ9UHL3 310 aa20.47■□□□□ 0.87
HERC2-204ENST00000563945 PSMD13Q9UNM6 376 aa20.47■□□□□ 0.87
HERC2-204ENST00000563945 WDR37Q9Y2I8 494 aa20.47■□□□□ 0.87
HERC2-204ENST00000563945 BLACEA4D250 179 aa20.46■□□□□ 0.87
HERC2-204ENST00000563945 AURKAO14965 403 aa20.46■□□□□ 0.87
HERC2-204ENST00000563945 AKR1B10O60218 316 aa20.46■□□□□ 0.87
HERC2-204ENST00000563945 GYPCP04921 128 aa20.46■□□□□ 0.87
HERC2-204ENST00000563945 TMEM253P0C7T8 217 aa20.46■□□□□ 0.87
HERC2-204ENST00000563945 FOLR1P15328 257 aa20.46■□□□□ 0.87
HERC2-204ENST00000563945 HMGCLP35914 325 aa20.46■□□□□ 0.87
HERC2-204ENST00000563945 ARHGAP25P42331 645 aa20.46■□□□□ 0.87
HERC2-204ENST00000563945 XRCC4Q13426 336 aa20.46■□□□□ 0.87
HERC2-204ENST00000563945 SEMA5AQ13591 1074 aa20.46■□□□□ 0.87
HERC2-204ENST00000563945 C4orf17Q53FE4 359 aa20.46■□□□□ 0.87
HERC2-204ENST00000563945 DNTTIP2Q5QJE6 756 aaKnown RBP20.46■□□□□ 0.87
HERC2-204ENST00000563945 TMTC4Q5T4D3 741 aa20.46■□□□□ 0.87
HERC2-204ENST00000563945 PWWP2BQ6NUJ5 590 aa20.46■□□□□ 0.87
HERC2-204ENST00000563945 C11orf96Q7Z7L8 435 aa20.46■□□□□ 0.87
HERC2-204ENST00000563945 TTC30BQ8N4P2 665 aa20.46■□□□□ 0.87
HERC2-204ENST00000563945 SLC41A2Q96JW4 573 aa20.46■□□□□ 0.87
HERC2-204ENST00000563945 CD180Q99467 661 aa20.46■□□□□ 0.87
HERC2-204ENST00000563945 FGF21Q9NSA1 209 aa20.46■□□□□ 0.87
HERC2-204ENST00000563945 HACD3Q9P035 362 aa20.46■□□□□ 0.87
HERC2-204ENST00000563945 SPO11Q9Y5K1 396 aa20.46■□□□□ 0.87
HERC2-204ENST00000563945 DNMT3AQ9Y6K1 912 aaPredicted RBP20.46■□□□□ 0.87
HERC2-204ENST00000563945 TIAF1O95411 115 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 TNNT1P13805 278 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 PTPN4P29074 926 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 SPAM1P38567 509 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 PGDP52209 483 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 HSD11B2P80365 405 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 ITGA9Q13797 1035 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 KCNAB1Q14722 419 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 RPE65Q16518 533 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 TMEM220Q6QAJ8 160 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 B4GALNT4Q76KP1 1039 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 SLC35G2Q8TBE7 412 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 TADA1Q96BN2 335 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 ZNF514Q96K75 400 aaPredicted RBP20.45■□□□□ 0.86
HERC2-204ENST00000563945 TEKT5Q96M29 485 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 OLFM3Q96PB7 478 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 MAP3K3Q99759 626 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 IL26Q9NPH9 171 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 ACSS2Q9NR19 701 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 IMP3Q9NV31 184 aaKnown RBP20.45■□□□□ 0.86
HERC2-204ENST00000563945 DDX56Q9NY93 547 aaKnown RBP20.45■□□□□ 0.86
HERC2-204ENST00000563945 IFNKQ9P0W0 207 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 TMPRSS11EQ9UL52 423 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 FARSAQ9Y285 508 aaKnown RBP20.45■□□□□ 0.86
HERC2-204ENST00000563945 PKP3Q9Y446 797 aa20.45■□□□□ 0.86
HERC2-204ENST00000563945 ZNF106Q9H2Y7 1883 aaKnown RBP20.45■□□□□ 0.86
HERC2-204ENST00000563945 USP9YO00507 2555 aaPredicted RBP20.44■□□□□ 0.86
HERC2-204ENST00000563945 UGT1A9O60656 530 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 KLK3P07288 261 aaPredicted RBP20.44■□□□□ 0.86
HERC2-204ENST00000563945 UGT1A6P19224 532 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 UGT1A1P22309 533 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 UGT1A4P22310 534 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 PBLDP30039 288 aaPredicted RBP20.44■□□□□ 0.86
HERC2-204ENST00000563945 NR2C2P49116 596 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 LONRF2Q1L5Z9 754 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 FHL5Q5TD97 284 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 FAM199XQ6PEV8 388 aaPredicted RBP20.44■□□□□ 0.86
HERC2-204ENST00000563945 FAM151BQ6UXP7 276 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 SYVN1Q86TM6 617 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 OOSP2Q86WS3 158 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 TMEM126BQ8IUX1 230 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 SLC25A41Q8N5S1 370 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 BEND7Q8N7W2 519 aaPredicted RBP20.44■□□□□ 0.86
HERC2-204ENST00000563945 TFB1MQ8WVM0 346 aaKnown RBP20.44■□□□□ 0.86
HERC2-204ENST00000563945 MR1Q95460 341 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 PSMG3-AS1Q96PY0 264 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 SLC25A23Q9BV35 468 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 UGT1A7Q9HAW7 530 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 UGT1A10Q9HAW8 530 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 UGT1A8Q9HAW9 530 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 HRASLS2Q9NWW9 162 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 SEMA5BQ9P283 1151 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 NENFQ9UMX5 172 aa20.44■□□□□ 0.86
HERC2-204ENST00000563945 G3BP2Q9UN86 482 aaKnown RBP20.44■□□□□ 0.86
HERC2-204ENST00000563945 GLYATL1P3A0A0U1RQE8 302 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 TLCD2A6NGC4 264 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 C3orf70A6NLC5 250 aaPredicted RBP20.43■□□□□ 0.86
HERC2-204ENST00000563945 OR2AG2A6NM03 316 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 CPNE3O75131 537 aaKnown RBP20.43■□□□□ 0.86
HERC2-204ENST00000563945 DNAJB5O75953 348 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 AGFG2O95081 481 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 EBLN1P0CF75 366 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 MSH3P20585 1137 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 PTPN3P26045 913 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 AKT1P31749 480 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 CCL11P51671 97 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 WNT3AP56704 352 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 PPP1CAP62136 330 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 DMPKQ09013 629 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 TFDP2Q14188 446 aa20.43■□□□□ 0.86
HERC2-204ENST00000563945 KRT33BQ14525 404 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms