RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 CTBSQ01459 385 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 ZNF846Q147U1 533 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 NDUFA5Q16718 116 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 AP5B1Q2VPB7 878 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 SLC36A3Q495N2 470 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 DEPDC1Q5TB30 811 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 GALNT18Q6P9A2 607 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 ZNF621Q6ZSS3 439 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 RAB2BQ8WUD1 216 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 CANT1Q8WVQ1 401 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 UPF1Q92900 1129 aaKnown RBP eCLIP10.34□□□□□ -0.752e-8■■■■□ 25.7
RNF40-204ENST00000563683 ZUFSPQ96AP4 578 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 FBXL8Q96CD0 374 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 CGREF1Q99674 301 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 ZDHHC6Q9H6R6 413 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 SH3BP4Q9P0V3 963 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 POLR3HQ9Y535 204 aaPredicted RBP10.34□□□□□ -0.75
RNF40-204ENST00000563683 SLC25A14O95258 325 aaPredicted RBP10.34□□□□□ -0.75
RNF40-204ENST00000563683 EPB42P16452 691 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 SERPINA4P29622 427 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 S100A3P33764 101 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 CCT8P50990 548 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 IL5RAQ01344 420 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 TUBA3CQ13748 450 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 ADAMTSL2Q86TH1 951 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 SERINC5Q86VE9 423 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 C2CD4AQ8NCU7 369 aaPredicted RBP10.34□□□□□ -0.75
RNF40-204ENST00000563683 IGSF8Q969P0 613 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 ACDQ96AP0 544 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 SCLYQ96I15 445 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 RPL10LQ96L21 214 aaKnown RBP10.34□□□□□ -0.75
RNF40-204ENST00000563683 TSGA13Q96PP4 275 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 SH3GL1Q99961 368 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 HOPXQ9BPY8 73 aaPredicted RBP10.34□□□□□ -0.75
RNF40-204ENST00000563683 TRIM8Q9BZR9 551 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 MAGEH1Q9H213 219 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 DYRK4Q9NR20 520 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 CCM2LQ9NUG4 571 aaPredicted RBP10.34□□□□□ -0.75
RNF40-204ENST00000563683 Q9Y3F1 56 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 U3KQV3 271 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 LRRC14BA6NHZ5 514 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 TRIM64BA6NI03 449 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 AQP12BA6NM10 295 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 CDC7O00311 574 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 EOMESO95936 686 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 NTRK1P04629 796 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 DNAJB1P25685 340 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 GGT5P36269 586 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 GATMP50440 423 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 LRP8Q14114 963 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 HACD2Q6Y1H2 254 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 AQP12AQ8IXF9 295 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 TTC9BQ8N6N2 239 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 GOLM1Q8NBJ4 401 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 FBXO22Q8NEZ5 403 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 STARD8Q92502 1023 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 MAGED4Q96JG8 741 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 SPATA17Q96L03 361 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 TNKS2Q9H2K2 1166 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 RMND5AQ9H871 391 aa10.34□□□□□ -0.75
RNF40-204ENST00000563683 MARCH4Q9P2E8 410 aaPredicted RBP10.34□□□□□ -0.75
RNF40-204ENST00000563683 PRORSD1PA6NEY8 169 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 IQCF5A8MTL0 148 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 M0R3G1 203 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 FYNP06241 537 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 CAPN1P07384 714 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 ZNF182P17025 639 aaPredicted RBP10.33□□□□□ -0.76
RNF40-204ENST00000563683 HERVK_113P63132 956 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 CYP2A13Q16696 494 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 SPESP1Q6UW49 350 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 P3H2Q8IVL5 708 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 TAGAPQ8N103 731 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 ATG16L2Q8NAA4 619 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 CENPNQ96H22 339 aaPredicted RBP10.33□□□□□ -0.76
RNF40-204ENST00000563683 ERVK-6Q9BXR3 956 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 MFSD1Q9H3U5 465 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 IPPKQ9H8X2 491 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 ZFYVE1Q9HBF4 777 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 HMG20AQ9NP66 347 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 CD300AQ9UGN4 299 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 PSME2Q9UL46 239 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 TMEM98Q9Y2Y6 226 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 LTBP1Q14766 1721 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 SYN3O14994 580 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 OXSR1O95747 527 aaPredicted RBP10.33□□□□□ -0.76
RNF40-204ENST00000563683 ANXA5P08758 320 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 SOAT1P35610 550 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 CAPGP40121 348 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 LIPEQ05469 1076 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 DMC1Q14565 340 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 STARD3Q14849 445 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 CCNYL2Q5T2Q4 361 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 PIK3R6Q5UE93 754 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 ALKAL1Q6UXT8 129 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 NANOGNBQ7Z5D8 188 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 TRIB2Q92519 343 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 MAELQ96JY0 434 aaKnown RBP10.33□□□□□ -0.76
RNF40-204ENST00000563683 TSSK3Q96PN8 268 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 ZNF347Q96SE7 839 aa10.33□□□□□ -0.76
RNF40-204ENST00000563683 RAD21L1Q9H4I0 556 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms